Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLK4Q9HAZ1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 UPK3BP1-201ENST00000428678 509 ntBASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 AC246785.2-201ENST00000432512 513 ntBASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 AL162727.3-201ENST00000635661 2787 ntBASIC17.06■□□□□ 0.32
CLK4Q9HAZ1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 DRAXINP1-201ENST00000437611 948 ntBASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLK4Q9HAZ1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 CICP6-201ENST00000457191 2729 ntBASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 AC006116.8-202ENST00000587620 1550 ntBASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLK4Q9HAZ1 AC068472.1-201ENST00000474589 881 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms