Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 AL355877.3-201ENST00000622820 899 ntBASIC14.54□□□□□ -0.08
GAFA1Q96PS6 AC073592.4-201ENST00000623827 446 ntBASIC14.54□□□□□ -0.08
GAFA1Q96PS6 SIGLEC16-201ENST00000599858 1437 ntBASIC14.54□□□□□ -0.08
GAFA1Q96PS6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GAFA1Q96PS6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 AC141586.5-201ENST00000624546 2050 ntBASIC14.53□□□□□ -0.08
GAFA1Q96PS6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 FGFR3P6-201ENST00000457012 610 ntBASIC14.53□□□□□ -0.08
GAFA1Q96PS6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 AF238378.1-201ENST00000526806 358 ntBASIC14.53□□□□□ -0.08
GAFA1Q96PS6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 KRT126P-201ENST00000549467 1181 ntBASIC14.53□□□□□ -0.08
GAFA1Q96PS6 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GAFA1Q96PS6 AC026471.1-201ENST00000564629 3026 ntBASIC14.52□□□□□ -0.08
GAFA1Q96PS6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
GAFA1Q96PS6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
GAFA1Q96PS6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
GAFA1Q96PS6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
GAFA1Q96PS6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.52□□□□□ -0.08
GAFA1Q96PS6 AC016396.2-201ENST00000562575 1417 ntBASIC14.52□□□□□ -0.08
GAFA1Q96PS6 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.52□□□□□ -0.08
GAFA1Q96PS6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
GAFA1Q96PS6 LETM1P2-201ENST00000597330 2178 ntBASIC14.52□□□□□ -0.08
GAFA1Q96PS6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 SIGLEC30P-201ENST00000455569 941 ntBASIC14.52□□□□□ -0.09
GAFA1Q96PS6 EMBP1-201ENST00000458200 901 ntBASIC14.52□□□□□ -0.09
GAFA1Q96PS6 BX005266.1-201ENST00000473402 457 ntBASIC14.52□□□□□ -0.09
GAFA1Q96PS6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 AC139713.2-201ENST00000641328 2723 ntBASIC14.52□□□□□ -0.09
GAFA1Q96PS6 AL356309.3-201ENST00000624132 1934 ntBASIC14.52□□□□□ -0.09
GAFA1Q96PS6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
GAFA1Q96PS6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms