Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 TMEM261P1-201ENST00000604899 340 ntBASIC17■□□□□ 0.31
CFAP54Q96N23 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CFAP54Q96N23 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.99■□□□□ 0.31
CFAP54Q96N23 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP54Q96N23 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP54Q96N23 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.99■□□□□ 0.31
CFAP54Q96N23 INE1-201ENST00000456273 945 ntBASIC16.99■□□□□ 0.31
CFAP54Q96N23 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.99■□□□□ 0.31
CFAP54Q96N23 FAM86C2P-203ENST00000528684 1004 ntBASIC16.99■□□□□ 0.31
CFAP54Q96N23 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.99■□□□□ 0.31
CFAP54Q96N23 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.99■□□□□ 0.31
CFAP54Q96N23 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP54Q96N23 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CFAP54Q96N23 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP54Q96N23 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP54Q96N23 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.99■□□□□ 0.31
CFAP54Q96N23 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP54Q96N23 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CFAP54Q96N23 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CFAP54Q96N23 AC009102.3-201ENST00000623118 1491 ntBASIC16.99■□□□□ 0.31
CFAP54Q96N23 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CFAP54Q96N23 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP54Q96N23 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP54Q96N23 AC096633.1-201ENST00000422446 749 ntBASIC16.99■□□□□ 0.31
CFAP54Q96N23 RBPMS2P1-201ENST00000437762 623 ntBASIC16.99■□□□□ 0.31
CFAP54Q96N23 AC079140.1-201ENST00000508039 487 ntBASIC16.99■□□□□ 0.31
CFAP54Q96N23 RHOQP1-201ENST00000555758 579 ntBASIC16.99■□□□□ 0.31
CFAP54Q96N23 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP54Q96N23 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CFAP54Q96N23 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
CFAP54Q96N23 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP54Q96N23 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP54Q96N23 AC002056.1-201ENST00000395613 760 ntBASIC16.98■□□□□ 0.31
CFAP54Q96N23 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP54Q96N23 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP54Q96N23 ESPNP-201ENST00000270691 2015 ntBASIC16.98■□□□□ 0.31
CFAP54Q96N23 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 FAM185BP-201ENST00000443595 716 ntBASIC16.98■□□□□ 0.31
CFAP54Q96N23 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP54Q96N23 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 AC126763.1-201ENST00000552015 2118 ntBASIC16.98■□□□□ 0.31
CFAP54Q96N23 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP54Q96N23 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP54Q96N23 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP54Q96N23 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP54Q96N23 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP54Q96N23 AL020989.1-201ENST00000422979 469 ntBASIC16.98■□□□□ 0.31
CFAP54Q96N23 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CFAP54Q96N23 RN7SL752P-201ENST00000463779 287 ntBASIC16.98■□□□□ 0.31
CFAP54Q96N23 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.98■□□□□ 0.31
CFAP54Q96N23 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 TMEM14DP-201ENST00000422205 345 ntBASIC16.97■□□□□ 0.31
CFAP54Q96N23 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 LINC01225-203ENST00000563550 1244 ntBASIC16.97■□□□□ 0.31
CFAP54Q96N23 AC026120.1-201ENST00000611536 926 ntBASIC16.97■□□□□ 0.31
CFAP54Q96N23 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.97■□□□□ 0.31
CFAP54Q96N23 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 FZD10-202ENST00000539839 3282 ntBASIC16.97■□□□□ 0.31
CFAP54Q96N23 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 AC020907.1-201ENST00000616460 1350 ntBASIC16.97■□□□□ 0.31
CFAP54Q96N23 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 AC022210.1-201ENST00000449856 793 ntBASIC16.97■□□□□ 0.31
CFAP54Q96N23 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CFAP54Q96N23 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms