Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 AC106730.1-201ENST00000566722 1090 ntBASIC16.54■□□□□ 0.24
TM9SF4Q92544 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.54■□□□□ 0.24
TM9SF4Q92544 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 INTS4P1-201ENST00000438455 1935 ntBASIC16.54■□□□□ 0.24
TM9SF4Q92544 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF4Q92544 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 TERC-201ENST00000602385 541 ntBASIC16.53■□□□□ 0.24
TM9SF4Q92544 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.53■□□□□ 0.24
TM9SF4Q92544 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 LINC00602-201ENST00000629776 2065 ntBASIC16.53■□□□□ 0.24
TM9SF4Q92544 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 AC125634.1-201ENST00000438758 1403 ntBASIC16.53■□□□□ 0.24
TM9SF4Q92544 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM9SF4Q92544 AC108860.2-201ENST00000562760 2183 ntBASIC16.53■□□□□ 0.24
TM9SF4Q92544 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.53■□□□□ 0.24
TM9SF4Q92544 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF4Q92544 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF4Q92544 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF4Q92544 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 PMS2P7-201ENST00000506558 1336 ntBASIC16.52■□□□□ 0.24
TM9SF4Q92544 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF4Q92544 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF4Q92544 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF4Q92544 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF4Q92544 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM9SF4Q92544 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.52■□□□□ 0.24
TM9SF4Q92544 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.52■□□□□ 0.24
TM9SF4Q92544 AL671883.3-201ENST00000603274 991 ntBASIC16.52■□□□□ 0.24
TM9SF4Q92544 AC148477.8-201ENST00000624298 468 ntBASIC16.52■□□□□ 0.24
TM9SF4Q92544 FAM215A-202ENST00000632077 792 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms