Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 AL645728.2-201ENST00000641974 660 ntBASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CASKIN1Q8WXD9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
CASKIN1Q8WXD9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC26.89■■□□□ 1.9
CASKIN1Q8WXD9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
CASKIN1Q8WXD9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC26.89■■□□□ 1.9
CASKIN1Q8WXD9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CASKIN1Q8WXD9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
CASKIN1Q8WXD9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CASKIN1Q8WXD9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 AC093028.1-201ENST00000622998 982 ntBASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CASKIN1Q8WXD9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 AC093520.2-201ENST00000561830 333 ntBASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CASKIN1Q8WXD9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 AC023141.5-201ENST00000458585 616 ntBASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 DUX4L17-201ENST00000557360 1267 ntBASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CASKIN1Q8WXD9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 AL645939.2-201ENST00000427340 991 ntBASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 AC009093.7-201ENST00000623853 1223 ntBASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CASKIN1Q8WXD9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CASKIN1Q8WXD9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CASKIN1Q8WXD9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
CASKIN1Q8WXD9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC26.85■■□□□ 1.89
CASKIN1Q8WXD9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC26.85■■□□□ 1.89
CASKIN1Q8WXD9 AC004835.2-201ENST00000603762 682 ntBASIC26.85■■□□□ 1.89
CASKIN1Q8WXD9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms