Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 AC005104.2-201ENST00000427818 678 ntBASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 AC011498.5-201ENST00000592027 486 ntBASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 AL592071.1-201ENST00000611956 408 ntBASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 AD000864.1-201ENST00000624076 2295 ntBASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00346Q8IVM7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 IGHV3-41-201ENST00000613121 348 ntBASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 AC099398.1-201ENST00000567919 2776 ntBASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00346Q8IVM7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms