Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRTM4Q86VH4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 AC093909.1-201ENST00000504731 1122 ntBASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 HLA-A-201ENST00000376802 1334 ntBASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRTM4Q86VH4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 HNRNPDP1-201ENST00000439535 754 ntBASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRTM4Q86VH4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 AC046185.3-201ENST00000623228 1824 ntBASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 LAGE3P1-201ENST00000425356 484 ntBASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 AC079776.4-201ENST00000511039 504 ntBASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 RNA5SP419-201ENST00000515908 135 ntBASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 FAM215A-202ENST00000632077 792 ntBASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 AC107918.4-202ENST00000641623 219 ntBASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRTM4Q86VH4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.14■□□□□ 0.34
LRRTM4Q86VH4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
LRRTM4Q86VH4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
LRRTM4Q86VH4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRRTM4Q86VH4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms