Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 SPTSSB-204ENST00000617024 1292 ntBASIC21.87■■□□□ 1.09
RGPD4Q7Z3J3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 DGCR5-201ENST00000399539 862 ntBASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 AC105233.2-201ENST00000523697 349 ntBASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 AF228730.5-201ENST00000530288 346 ntBASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
RGPD4Q7Z3J3 AC046185.3-201ENST00000623228 1824 ntBASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RGPD4Q7Z3J3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 AL080243.2-201ENST00000418783 582 ntBASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 DFFBP1-201ENST00000433250 979 ntBASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 RARRES2P9-201ENST00000565168 469 ntBASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.84■■□□□ 1.09
RGPD4Q7Z3J3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RGPD4Q7Z3J3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RGPD4Q7Z3J3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.83■■□□□ 1.09
RGPD4Q7Z3J3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.83■■□□□ 1.09
RGPD4Q7Z3J3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RGPD4Q7Z3J3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.83■■□□□ 1.09
RGPD4Q7Z3J3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RGPD4Q7Z3J3 AC012569.1-201ENST00000591191 1524 ntBASIC21.83■■□□□ 1.09
RGPD4Q7Z3J3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RGPD4Q7Z3J3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms