Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 KRT18P27-201ENST00000427733 1299 ntBASIC20.76■□□□□ 0.91
CTR9Q6PD62 AC092910.1-201ENST00000482027 1129 ntBASIC20.76■□□□□ 0.91
CTR9Q6PD62 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 IGHV3-22-201ENST00000520721 359 ntBASIC20.76■□□□□ 0.91
CTR9Q6PD62 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 AC105339.3-201ENST00000560043 636 ntBASIC20.76■□□□□ 0.91
CTR9Q6PD62 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 AF228730.7-201ENST00000641842 219 ntBASIC20.76■□□□□ 0.91
CTR9Q6PD62 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.76■□□□□ 0.91
CTR9Q6PD62 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTR9Q6PD62 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTR9Q6PD62 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTR9Q6PD62 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 AC073621.1-201ENST00000392730 636 ntBASIC20.75■□□□□ 0.91
CTR9Q6PD62 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTR9Q6PD62 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 AL589182.2-201ENST00000619332 1049 ntBASIC20.75■□□□□ 0.91
CTR9Q6PD62 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTR9Q6PD62 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTR9Q6PD62 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTR9Q6PD62 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTR9Q6PD62 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTR9Q6PD62 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTR9Q6PD62 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.75■□□□□ 0.91
CTR9Q6PD62 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTR9Q6PD62 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTR9Q6PD62 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTR9Q6PD62 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTR9Q6PD62 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 AL671883.3-201ENST00000603274 991 ntBASIC20.74■□□□□ 0.91
CTR9Q6PD62 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTR9Q6PD62 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTR9Q6PD62 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTR9Q6PD62 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTR9Q6PD62 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTR9Q6PD62 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CTR9Q6PD62 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTR9Q6PD62 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTR9Q6PD62 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 AC098831.1-202ENST00000438821 336 ntBASIC20.73■□□□□ 0.91
CTR9Q6PD62 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 RPL13AP23-201ENST00000480739 586 ntBASIC20.73■□□□□ 0.91
CTR9Q6PD62 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 AC004706.3-202ENST00000621574 984 ntBASIC20.73■□□□□ 0.91
CTR9Q6PD62 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTR9Q6PD62 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTR9Q6PD62 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTR9Q6PD62 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.73■□□□□ 0.91
CTR9Q6PD62 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms