Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LGSNQ5TDP6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.67■□□□□ 0.42
LGSNQ5TDP6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LGSNQ5TDP6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LGSNQ5TDP6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LGSNQ5TDP6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 ECEL1P3-201ENST00000427961 737 ntBASIC17.66■□□□□ 0.42
LGSNQ5TDP6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 ECEL1P2-202ENST00000465689 757 ntBASIC17.66■□□□□ 0.42
LGSNQ5TDP6 AC093827.2-201ENST00000512654 315 ntBASIC17.66■□□□□ 0.42
LGSNQ5TDP6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 FAM87A-204ENST00000613235 858 ntBASIC17.66■□□□□ 0.42
LGSNQ5TDP6 AC010947.1-201ENST00000623454 693 ntBASIC17.66■□□□□ 0.42
LGSNQ5TDP6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LGSNQ5TDP6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 TNRC18P3-201ENST00000441896 2691 ntBASIC17.65■□□□□ 0.42
LGSNQ5TDP6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 MMP23A-201ENST00000234610 1017 ntBASIC17.65■□□□□ 0.42
LGSNQ5TDP6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 KRT18P48-201ENST00000434763 852 ntBASIC17.65■□□□□ 0.42
LGSNQ5TDP6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 AL139327.4-201ENST00000612362 153 ntBASIC17.65■□□□□ 0.42
LGSNQ5TDP6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LGSNQ5TDP6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
LGSNQ5TDP6 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.64■□□□□ 0.42
LGSNQ5TDP6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LGSNQ5TDP6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
LGSNQ5TDP6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
LGSNQ5TDP6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGSNQ5TDP6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGSNQ5TDP6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
LGSNQ5TDP6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGSNQ5TDP6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LGSNQ5TDP6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.64■□□□□ 0.41
LGSNQ5TDP6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
LGSNQ5TDP6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGSNQ5TDP6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGSNQ5TDP6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGSNQ5TDP6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LGSNQ5TDP6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms