Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 AC093677.2-201ENST00000600169 1863 ntBASIC28.23■■■□□ 2.11
SNAPC4Q5SXM2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 MIR4453-201ENST00000584019 89 ntBASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC28.22■■■□□ 2.11
SNAPC4Q5SXM2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 AL132655.2-201ENST00000596276 594 ntBASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 CROCCP3-202ENST00000420820 1947 ntBASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC28.21■■■□□ 2.11
SNAPC4Q5SXM2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SNAPC4Q5SXM2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SNAPC4Q5SXM2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SNAPC4Q5SXM2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC28.2■■■□□ 2.11
SNAPC4Q5SXM2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SNAPC4Q5SXM2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 MIR1909-201ENST00000411312 80 ntBASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNAPC4Q5SXM2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 WASH6P-202ENST00000359512 1437 ntBASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 AC046185.3-201ENST00000623228 1824 ntBASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SNAPC4Q5SXM2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SNAPC4Q5SXM2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms