Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.94■□□□□ 0.3
ATP6AP1LQ52LC2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 MIR662-201ENST00000384847 95 ntBASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 AC068472.1-201ENST00000474589 881 ntBASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 AC139887.4-201ENST00000607877 719 ntBASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
ATP6AP1LQ52LC2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 AC116353.5-201ENST00000638148 1699 ntBASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 AC113347.1-201ENST00000413321 391 ntBASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 AC096633.1-201ENST00000422446 749 ntBASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 AL137013.1-201ENST00000432946 1228 ntBASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 AL359075.1-203ENST00000462729 1002 ntBASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 AC005363.2-201ENST00000618631 242 ntBASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP6AP1LQ52LC2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms