Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 AC005104.2-201ENST00000427818 678 ntBASIC19.91■□□□□ 0.78
LONRF3Q496Y0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 AC104819.1-201ENST00000504587 486 ntBASIC19.91■□□□□ 0.78
LONRF3Q496Y0 AC111152.3-201ENST00000569699 673 ntBASIC19.91■□□□□ 0.78
LONRF3Q496Y0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 AC233702.3-201ENST00000578656 1387 ntBASIC19.91■□□□□ 0.78
LONRF3Q496Y0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LONRF3Q496Y0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 NUS1P1-201ENST00000446295 882 ntBASIC19.9■□□□□ 0.78
LONRF3Q496Y0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 AC012615.1-201ENST00000565797 1299 ntBASIC19.9■□□□□ 0.78
LONRF3Q496Y0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 AC099336.1-202ENST00000602961 463 ntBASIC19.9■□□□□ 0.78
LONRF3Q496Y0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LONRF3Q496Y0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.89■□□□□ 0.78
LONRF3Q496Y0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
LONRF3Q496Y0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.78
LONRF3Q496Y0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
LONRF3Q496Y0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LONRF3Q496Y0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 AC091304.2-201ENST00000564639 760 ntBASIC19.89■□□□□ 0.77
LONRF3Q496Y0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.89■□□□□ 0.77
LONRF3Q496Y0 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.89■□□□□ 0.77
LONRF3Q496Y0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
LONRF3Q496Y0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.88■□□□□ 0.77
LONRF3Q496Y0 TSPY19P-201ENST00000418461 509 ntBASIC19.88■□□□□ 0.77
LONRF3Q496Y0 AC096633.1-201ENST00000422446 749 ntBASIC19.88■□□□□ 0.77
LONRF3Q496Y0 TSPY18P-201ENST00000441642 509 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms