Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC144BQ3MJ40 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC144BQ3MJ40 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 AC006116.8-202ENST00000587620 1550 ntBASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 RPS2P1-201ENST00000434010 821 ntBASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 IGHV3-22-201ENST00000520721 359 ntBASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC144BQ3MJ40 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC144BQ3MJ40 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC144BQ3MJ40 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms