Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.66■□□□□ 0.42
PRAMEP78395 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
PRAMEP78395 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PRAMEP78395 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.66■□□□□ 0.42
PRAMEP78395 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.66■□□□□ 0.42
PRAMEP78395 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PRAMEP78395 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PRAMEP78395 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.66■□□□□ 0.42
PRAMEP78395 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PRAMEP78395 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 AC016734.2-201ENST00000624325 1377 ntBASIC17.66■□□□□ 0.42
PRAMEP78395 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PRAMEP78395 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.66■□□□□ 0.42
PRAMEP78395 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.65■□□□□ 0.42
PRAMEP78395 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.65■□□□□ 0.42
PRAMEP78395 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PRAMEP78395 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.65■□□□□ 0.42
PRAMEP78395 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PRAMEP78395 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.65■□□□□ 0.42
PRAMEP78395 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 CROCCP2-202ENST00000412962 2773 ntBASIC17.65■□□□□ 0.42
PRAMEP78395 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 COX5BP2-201ENST00000392354 334 ntBASIC17.65■□□□□ 0.42
PRAMEP78395 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.65■□□□□ 0.42
PRAMEP78395 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PRAMEP78395 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.65■□□□□ 0.42
PRAMEP78395 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.65■□□□□ 0.42
PRAMEP78395 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.65■□□□□ 0.42
PRAMEP78395 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.65■□□□□ 0.42
PRAMEP78395 AL353801.3-201ENST00000609898 542 ntBASIC17.65■□□□□ 0.42
PRAMEP78395 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.65■□□□□ 0.42
PRAMEP78395 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.65■□□□□ 0.42
PRAMEP78395 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRAMEP78395 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.64■□□□□ 0.42
PRAMEP78395 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PRAMEP78395 AC125634.1-201ENST00000438758 1403 ntBASIC17.64■□□□□ 0.42
PRAMEP78395 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.64■□□□□ 0.42
PRAMEP78395 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PRAMEP78395 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PRAMEP78395 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PRAMEP78395 AL845331.1-201ENST00000424978 1190 ntBASIC17.64■□□□□ 0.41
PRAMEP78395 AC246785.2-201ENST00000432512 513 ntBASIC17.64■□□□□ 0.41
PRAMEP78395 AC007967.3-201ENST00000434308 558 ntBASIC17.64■□□□□ 0.41
PRAMEP78395 TSSC2-201ENST00000450217 709 ntBASIC17.64■□□□□ 0.41
PRAMEP78395 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.64■□□□□ 0.41
PRAMEP78395 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.64■□□□□ 0.41
PRAMEP78395 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PRAMEP78395 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PRAMEP78395 KRT18P1-202ENST00000452408 1331 ntBASIC17.64■□□□□ 0.41
PRAMEP78395 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms