Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA4P78363 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA4P78363 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.01□□□□□ -0.01
ABCA4P78363 AL139400.1-201ENST00000366220 510 ntBASIC15.01□□□□□ -0.01
ABCA4P78363 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
ABCA4P78363 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
ABCA4P78363 COX5BP2-201ENST00000392354 334 ntBASIC15.01□□□□□ -0.01
ABCA4P78363 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.01□□□□□ -0.01
ABCA4P78363 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.01□□□□□ -0.01
ABCA4P78363 AC004449.1-201ENST00000564240 433 ntBASIC15.01□□□□□ -0.01
ABCA4P78363 AL031432.2-201ENST00000566714 459 ntBASIC15.01□□□□□ -0.01
ABCA4P78363 AL928711.1-201ENST00000570165 459 ntBASIC15.01□□□□□ -0.01
ABCA4P78363 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA4P78363 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.01□□□□□ -0.01
ABCA4P78363 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.01□□□□□ -0.01
ABCA4P78363 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ABCA4P78363 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA4P78363 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA4P78363 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA4P78363 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ABCA4P78363 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA4P78363 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA4P78363 AP000997.3-201ENST00000623333 2250 ntBASIC15.01□□□□□ -0.01
ABCA4P78363 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.01□□□□□ -0.01
ABCA4P78363 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15□□□□□ -0.01
ABCA4P78363 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
ABCA4P78363 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15□□□□□ -0.01
ABCA4P78363 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 AC097637.2-201ENST00000624096 1997 ntBASIC15□□□□□ -0.01
ABCA4P78363 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15□□□□□ -0.01
ABCA4P78363 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15□□□□□ -0.01
ABCA4P78363 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15□□□□□ -0.01
ABCA4P78363 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15□□□□□ -0.01
ABCA4P78363 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15□□□□□ -0.01
ABCA4P78363 AL513210.1-201ENST00000629608 234 ntBASIC15□□□□□ -0.01
ABCA4P78363 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15□□□□□ -0.01
ABCA4P78363 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15□□□□□ -0.01
ABCA4P78363 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15□□□□□ -0.01
ABCA4P78363 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15□□□□□ -0.01
ABCA4P78363 ACTG1P4-201ENST00000425123 1122 ntBASIC15□□□□□ -0.01
ABCA4P78363 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15□□□□□ -0.01
ABCA4P78363 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15□□□□□ -0.01
ABCA4P78363 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
ABCA4P78363 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15□□□□□ -0.01
ABCA4P78363 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15□□□□□ -0.01
ABCA4P78363 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15□□□□□ -0.01
ABCA4P78363 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15□□□□□ -0.01
ABCA4P78363 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15□□□□□ -0.01
ABCA4P78363 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
ABCA4P78363 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA4P78363 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15□□□□□ -0.01
ABCA4P78363 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15□□□□□ -0.01
ABCA4P78363 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15□□□□□ -0.01
ABCA4P78363 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
ABCA4P78363 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCA4P78363 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
ABCA4P78363 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ABCA4P78363 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
ABCA4P78363 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCA4P78363 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCA4P78363 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
ABCA4P78363 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCA4P78363 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCA4P78363 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.99□□□□□ -0.01
ABCA4P78363 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCA4P78363 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA4P78363 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.99□□□□□ -0.01
ABCA4P78363 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms