Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VSX2P58304 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VSX2P58304 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.77■□□□□ 0.27
VSX2P58304 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VSX2P58304 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.76■□□□□ 0.27
VSX2P58304 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VSX2P58304 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.76■□□□□ 0.27
VSX2P58304 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.76■□□□□ 0.27
VSX2P58304 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VSX2P58304 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.76■□□□□ 0.27
VSX2P58304 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.76■□□□□ 0.27
VSX2P58304 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VSX2P58304 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.76■□□□□ 0.27
VSX2P58304 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.76■□□□□ 0.27
VSX2P58304 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
VSX2P58304 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.76■□□□□ 0.27
VSX2P58304 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
VSX2P58304 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 SART3-203ENST00000546611 1184 ntBASIC16.76■□□□□ 0.27
VSX2P58304 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.76■□□□□ 0.27
VSX2P58304 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.76■□□□□ 0.27
VSX2P58304 NKAPP1-205ENST00000585790 367 ntBASIC16.76■□□□□ 0.27
VSX2P58304 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.76■□□□□ 0.27
VSX2P58304 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.76■□□□□ 0.27
VSX2P58304 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VSX2P58304 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VSX2P58304 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VSX2P58304 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VSX2P58304 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.76■□□□□ 0.27
VSX2P58304 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VSX2P58304 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
VSX2P58304 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VSX2P58304 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.75■□□□□ 0.27
VSX2P58304 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.75■□□□□ 0.27
VSX2P58304 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.75■□□□□ 0.27
VSX2P58304 MRPL3P1-201ENST00000400109 1033 ntBASIC16.75■□□□□ 0.27
VSX2P58304 KLF4P1-201ENST00000412782 1185 ntBASIC16.75■□□□□ 0.27
VSX2P58304 AF186996.4-201ENST00000467186 377 ntBASIC16.75■□□□□ 0.27
VSX2P58304 AC002558.1-201ENST00000488906 803 ntBASIC16.75■□□□□ 0.27
VSX2P58304 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.75■□□□□ 0.27
VSX2P58304 AC073648.2-201ENST00000510116 352 ntBASIC16.75■□□□□ 0.27
VSX2P58304 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.75■□□□□ 0.27
VSX2P58304 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.75■□□□□ 0.27
VSX2P58304 AL139288.1-201ENST00000623748 933 ntBASIC16.75■□□□□ 0.27
VSX2P58304 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.75■□□□□ 0.27
VSX2P58304 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.75■□□□□ 0.27
VSX2P58304 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
VSX2P58304 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.75■□□□□ 0.27
VSX2P58304 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VSX2P58304 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VSX2P58304 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.75■□□□□ 0.27
VSX2P58304 AC132938.5-201ENST00000624980 1813 ntBASIC16.75■□□□□ 0.27
VSX2P58304 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VSX2P58304 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VSX2P58304 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.74■□□□□ 0.27
VSX2P58304 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VSX2P58304 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
VSX2P58304 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
VSX2P58304 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
VSX2P58304 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.74■□□□□ 0.27
VSX2P58304 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VSX2P58304 FDX1P1-201ENST00000449115 551 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms