Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDH4P55283 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH4P55283 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH4P55283 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CDH4P55283 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CDH4P55283 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDH4P55283 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDH4P55283 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 AC097637.2-201ENST00000624096 1997 ntBASIC17.86■□□□□ 0.45
CDH4P55283 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH4P55283 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CDH4P55283 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH4P55283 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.86■□□□□ 0.45
CDH4P55283 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.86■□□□□ 0.45
CDH4P55283 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.86■□□□□ 0.45
CDH4P55283 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH4P55283 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH4P55283 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.86■□□□□ 0.45
CDH4P55283 AC008735.5-201ENST00000623544 497 ntBASIC17.86■□□□□ 0.45
CDH4P55283 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CDH4P55283 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDH4P55283 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH4P55283 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDH4P55283 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CDH4P55283 AC067852.2-201ENST00000590513 2313 ntBASIC17.86■□□□□ 0.45
CDH4P55283 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH4P55283 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDH4P55283 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.85■□□□□ 0.45
CDH4P55283 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH4P55283 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.85■□□□□ 0.45
CDH4P55283 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH4P55283 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH4P55283 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.85■□□□□ 0.45
CDH4P55283 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH4P55283 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDH4P55283 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 AC006557.2-201ENST00000592985 1240 ntBASIC17.85■□□□□ 0.45
CDH4P55283 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH4P55283 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH4P55283 MIR7706-201ENST00000613747 67 ntBASIC17.85■□□□□ 0.45
CDH4P55283 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.85■□□□□ 0.45
CDH4P55283 AL135999.2-201ENST00000622438 1686 ntBASIC17.85■□□□□ 0.45
CDH4P55283 AL138688.1-201ENST00000624851 1594 ntBASIC17.85■□□□□ 0.45
CDH4P55283 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH4P55283 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH4P55283 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDH4P55283 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH4P55283 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CDH4P55283 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDH4P55283 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CDH4P55283 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CDH4P55283 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH4P55283 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH4P55283 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH4P55283 ACTG1P4-201ENST00000425123 1122 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms