Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
EPHA4P54764 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHA4P54764 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
EPHA4P54764 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHA4P54764 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
EPHA4P54764 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHA4P54764 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
EPHA4P54764 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
EPHA4P54764 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.82■□□□□ 0.28
EPHA4P54764 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.82■□□□□ 0.28
EPHA4P54764 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.82■□□□□ 0.28
EPHA4P54764 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.82■□□□□ 0.28
EPHA4P54764 AC040169.1-201ENST00000565382 521 ntBASIC16.82■□□□□ 0.28
EPHA4P54764 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.82■□□□□ 0.28
EPHA4P54764 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHA4P54764 AC008667.4-201ENST00000607370 168 ntBASIC16.82■□□□□ 0.28
EPHA4P54764 LINC01451-201ENST00000623792 534 ntBASIC16.82■□□□□ 0.28
EPHA4P54764 AL805961.1-202ENST00000641562 540 ntBASIC16.82■□□□□ 0.28
EPHA4P54764 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EPHA4P54764 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 AC097637.2-201ENST00000624096 1997 ntBASIC16.82■□□□□ 0.28
EPHA4P54764 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
EPHA4P54764 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA4P54764 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EPHA4P54764 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHA4P54764 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
EPHA4P54764 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EPHA4P54764 AC104581.1-202ENST00000635932 2618 ntBASIC16.81■□□□□ 0.28
EPHA4P54764 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
EPHA4P54764 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHA4P54764 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.81■□□□□ 0.28
EPHA4P54764 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
EPHA4P54764 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.81■□□□□ 0.28
EPHA4P54764 ACTG1P4-201ENST00000425123 1122 ntBASIC16.81■□□□□ 0.28
EPHA4P54764 SLC25A6P5-201ENST00000435663 894 ntBASIC16.81■□□□□ 0.28
EPHA4P54764 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.81■□□□□ 0.28
EPHA4P54764 RPS15P9-201ENST00000494093 319 ntBASIC16.81■□□□□ 0.28
EPHA4P54764 IGHV3-65-201ENST00000523210 341 ntBASIC16.81■□□□□ 0.28
EPHA4P54764 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHA4P54764 AC092865.5-201ENST00000545435 363 ntBASIC16.81■□□□□ 0.28
EPHA4P54764 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
EPHA4P54764 AL353135.1-201ENST00000606729 504 ntBASIC16.81■□□□□ 0.28
EPHA4P54764 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.81■□□□□ 0.28
EPHA4P54764 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.81■□□□□ 0.28
EPHA4P54764 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
EPHA4P54764 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EPHA4P54764 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EPHA4P54764 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA4P54764 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EPHA4P54764 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA4P54764 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA4P54764 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
EPHA4P54764 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHA4P54764 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.8■□□□□ 0.28
EPHA4P54764 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
EPHA4P54764 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EPHA4P54764 LINC00982-205ENST00000420957 435 ntBASIC16.8■□□□□ 0.28
EPHA4P54764 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.8■□□□□ 0.28
EPHA4P54764 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
EPHA4P54764 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.8■□□□□ 0.28
EPHA4P54764 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms