Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC026396.1-201ENST00000419388 421 ntBASIC18.06■□□□□ 0.48
NEK3P51956 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.06■□□□□ 0.48
NEK3P51956 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.06■□□□□ 0.48
NEK3P51956 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.06■□□□□ 0.48
NEK3P51956 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK3P51956 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEK3P51956 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.06■□□□□ 0.48
NEK3P51956 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEK3P51956 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK3P51956 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK3P51956 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEK3P51956 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NEK3P51956 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK3P51956 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
NEK3P51956 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK3P51956 AC132938.6-201ENST00000623828 1655 ntBASIC18.06■□□□□ 0.48
NEK3P51956 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK3P51956 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK3P51956 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK3P51956 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.05■□□□□ 0.48
NEK3P51956 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.05■□□□□ 0.48
NEK3P51956 AC008894.3-201ENST00000624324 3103 ntBASIC18.05■□□□□ 0.48
NEK3P51956 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NEK3P51956 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NEK3P51956 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.05■□□□□ 0.48
NEK3P51956 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.05■□□□□ 0.48
NEK3P51956 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 EMBP1-201ENST00000458200 901 ntBASIC18.05■□□□□ 0.48
NEK3P51956 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.05■□□□□ 0.48
NEK3P51956 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.05■□□□□ 0.48
NEK3P51956 AC114341.1-201ENST00000618070 349 ntBASIC18.05■□□□□ 0.48
NEK3P51956 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.05■□□□□ 0.48
NEK3P51956 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.05■□□□□ 0.48
NEK3P51956 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.05■□□□□ 0.48
NEK3P51956 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.05■□□□□ 0.48
NEK3P51956 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NEK3P51956 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.05■□□□□ 0.48
NEK3P51956 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK3P51956 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
NEK3P51956 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NEK3P51956 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
NEK3P51956 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NEK3P51956 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.04■□□□□ 0.48
NEK3P51956 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.04■□□□□ 0.48
NEK3P51956 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.04■□□□□ 0.48
NEK3P51956 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NEK3P51956 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NEK3P51956 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
NEK3P51956 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.04■□□□□ 0.48
NEK3P51956 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.04■□□□□ 0.48
NEK3P51956 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.04■□□□□ 0.48
NEK3P51956 AC112698.1-201ENST00000510299 916 ntBASIC18.04■□□□□ 0.48
NEK3P51956 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.04■□□□□ 0.48
NEK3P51956 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NEK3P51956 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NEK3P51956 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.04■□□□□ 0.48
NEK3P51956 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NEK3P51956 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.04■□□□□ 0.48
NEK3P51956 AL138688.1-201ENST00000624851 1594 ntBASIC18.04■□□□□ 0.48
NEK3P51956 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK3P51956 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.04■□□□□ 0.48
NEK3P51956 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK3P51956 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NEK3P51956 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK3P51956 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK3P51956 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.03■□□□□ 0.48
NEK3P51956 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NEK3P51956 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.03■□□□□ 0.48
NEK3P51956 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NEK3P51956 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEK3P51956 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms