Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.37■□□□□ 0.69
BRCA2P51587 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
BRCA2P51587 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.37■□□□□ 0.69
BRCA2P51587 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.37■□□□□ 0.69
BRCA2P51587 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
BRCA2P51587 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRCA2P51587 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRCA2P51587 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRCA2P51587 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRCA2P51587 SPDYE7P-202ENST00000420373 878 ntBASIC19.37■□□□□ 0.69
BRCA2P51587 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.37■□□□□ 0.69
BRCA2P51587 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRCA2P51587 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRCA2P51587 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BRCA2P51587 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
BRCA2P51587 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
BRCA2P51587 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.37■□□□□ 0.69
BRCA2P51587 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.37■□□□□ 0.69
BRCA2P51587 AC017083.2-201ENST00000608069 979 ntBASIC19.37■□□□□ 0.69
BRCA2P51587 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.36■□□□□ 0.69
BRCA2P51587 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.36■□□□□ 0.69
BRCA2P51587 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 DDX43P3-201ENST00000441064 443 ntBASIC19.36■□□□□ 0.69
BRCA2P51587 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
BRCA2P51587 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.36■□□□□ 0.69
BRCA2P51587 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.36■□□□□ 0.69
BRCA2P51587 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.36■□□□□ 0.69
BRCA2P51587 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.36■□□□□ 0.69
BRCA2P51587 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.36■□□□□ 0.69
BRCA2P51587 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.36■□□□□ 0.69
BRCA2P51587 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.36■□□□□ 0.69
BRCA2P51587 AC026150.2-201ENST00000564693 1156 ntBASIC19.36■□□□□ 0.69
BRCA2P51587 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.36■□□□□ 0.69
BRCA2P51587 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.36■□□□□ 0.69
BRCA2P51587 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
BRCA2P51587 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
BRCA2P51587 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
BRCA2P51587 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.36■□□□□ 0.69
BRCA2P51587 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BRCA2P51587 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
BRCA2P51587 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.35■□□□□ 0.69
BRCA2P51587 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
BRCA2P51587 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
BRCA2P51587 RBPMS2P1-201ENST00000437762 623 ntBASIC19.35■□□□□ 0.69
BRCA2P51587 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.35■□□□□ 0.69
BRCA2P51587 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.35■□□□□ 0.69
BRCA2P51587 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BRCA2P51587 AC135776.1-201ENST00000319817 2481 ntBASIC19.35■□□□□ 0.69
BRCA2P51587 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRCA2P51587 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCA2P51587 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
BRCA2P51587 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCA2P51587 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
BRCA2P51587 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRCA2P51587 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCA2P51587 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.35■□□□□ 0.69
BRCA2P51587 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCA2P51587 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
BRCA2P51587 COX5BP2-201ENST00000392354 334 ntBASIC19.35■□□□□ 0.69
BRCA2P51587 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCA2P51587 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.35■□□□□ 0.69
BRCA2P51587 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
BRCA2P51587 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BRCA2P51587 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
BRCA2P51587 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BRCA2P51587 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.34■□□□□ 0.69
BRCA2P51587 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.34■□□□□ 0.69
BRCA2P51587 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.34■□□□□ 0.69
BRCA2P51587 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.34■□□□□ 0.69
BRCA2P51587 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.34■□□□□ 0.69
BRCA2P51587 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
BRCA2P51587 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.34■□□□□ 0.69
BRCA2P51587 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BRCA2P51587 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.34■□□□□ 0.69
BRCA2P51587 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.34■□□□□ 0.69
BRCA2P51587 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.34■□□□□ 0.69
BRCA2P51587 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.34■□□□□ 0.69
BRCA2P51587 STK25P1-201ENST00000585406 838 ntBASIC19.34■□□□□ 0.69
BRCA2P51587 AL162274.1-201ENST00000617191 1098 ntBASIC19.34■□□□□ 0.69
BRCA2P51587 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
BRCA2P51587 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms