Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.41■■□□□ 1.02
PDE6BP35913 AC243562.1-201ENST00000560672 389 ntBASIC21.41■■□□□ 1.02
PDE6BP35913 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.41■■□□□ 1.02
PDE6BP35913 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PDE6BP35913 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
PDE6BP35913 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PDE6BP35913 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.4■■□□□ 1.02
PDE6BP35913 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.4■■□□□ 1.02
PDE6BP35913 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.4■■□□□ 1.02
PDE6BP35913 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
PDE6BP35913 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.4■■□□□ 1.02
PDE6BP35913 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.4■■□□□ 1.02
PDE6BP35913 FAM58DP-201ENST00000428076 619 ntBASIC21.4■■□□□ 1.02
PDE6BP35913 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.4■■□□□ 1.02
PDE6BP35913 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 AC002472.2-201ENST00000442739 958 ntBASIC21.4■■□□□ 1.02
PDE6BP35913 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.4■■□□□ 1.02
PDE6BP35913 TSPY16P-201ENST00000449843 468 ntBASIC21.4■■□□□ 1.02
PDE6BP35913 KLF2P3-201ENST00000451977 1087 ntBASIC21.4■■□□□ 1.02
PDE6BP35913 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.4■■□□□ 1.02
PDE6BP35913 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.4■■□□□ 1.02
PDE6BP35913 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
PDE6BP35913 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PDE6BP35913 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.4■■□□□ 1.02
PDE6BP35913 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.4■■□□□ 1.02
PDE6BP35913 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.4■■□□□ 1.02
PDE6BP35913 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PDE6BP35913 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PDE6BP35913 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PDE6BP35913 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.4■■□□□ 1.02
PDE6BP35913 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.02
PDE6BP35913 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.39■■□□□ 1.02
PDE6BP35913 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
PDE6BP35913 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDE6BP35913 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
PDE6BP35913 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDE6BP35913 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.02
PDE6BP35913 AKAP8P1-201ENST00000434743 1349 ntBASIC21.39■■□□□ 1.01
PDE6BP35913 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
PDE6BP35913 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE6BP35913 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.39■■□□□ 1.01
PDE6BP35913 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.39■■□□□ 1.01
PDE6BP35913 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.39■■□□□ 1.01
PDE6BP35913 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PDE6BP35913 RN7SL204P-201ENST00000582831 262 ntBASIC21.39■■□□□ 1.01
PDE6BP35913 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.39■■□□□ 1.01
PDE6BP35913 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.39■■□□□ 1.01
PDE6BP35913 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE6BP35913 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE6BP35913 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE6BP35913 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE6BP35913 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDE6BP35913 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE6BP35913 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PDE6BP35913 AC046185.3-201ENST00000623228 1824 ntBASIC21.39■■□□□ 1.01
PDE6BP35913 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.38■■□□□ 1.01
PDE6BP35913 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.38■■□□□ 1.01
PDE6BP35913 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDE6BP35913 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDE6BP35913 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDE6BP35913 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDE6BP35913 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PDE6BP35913 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
PDE6BP35913 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.38■■□□□ 1.01
PDE6BP35913 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDE6BP35913 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDE6BP35913 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDE6BP35913 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PDE6BP35913 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.38■■□□□ 1.01
PDE6BP35913 AL135744.1-201ENST00000565098 629 ntBASIC21.38■■□□□ 1.01
PDE6BP35913 RARRES2P8-201ENST00000566335 367 ntBASIC21.38■■□□□ 1.01
PDE6BP35913 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDE6BP35913 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.38■■□□□ 1.01
PDE6BP35913 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.38■■□□□ 1.01
PDE6BP35913 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.38■■□□□ 1.01
PDE6BP35913 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.38■■□□□ 1.01
PDE6BP35913 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PDE6BP35913 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDE6BP35913 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDE6BP35913 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.38■■□□□ 1.01
PDE6BP35913 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PDE6BP35913 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDE6BP35913 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.37■■□□□ 1.01
PDE6BP35913 AL020996.1-203ENST00000536896 2307 ntBASIC21.37■■□□□ 1.01
PDE6BP35913 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.37■■□□□ 1.01
PDE6BP35913 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDE6BP35913 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDE6BP35913 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms