Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.94■□□□□ 0.78
CLCN1P35523 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.94■□□□□ 0.78
CLCN1P35523 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.94■□□□□ 0.78
CLCN1P35523 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.94■□□□□ 0.78
CLCN1P35523 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLCN1P35523 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCN1P35523 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CLCN1P35523 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.93■□□□□ 0.78
CLCN1P35523 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN1P35523 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN1P35523 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.93■□□□□ 0.78
CLCN1P35523 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CLCN1P35523 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.93■□□□□ 0.78
CLCN1P35523 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN1P35523 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN1P35523 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN1P35523 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.93■□□□□ 0.78
CLCN1P35523 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN1P35523 MIR564-202ENST00000385049 94 ntBASIC19.93■□□□□ 0.78
CLCN1P35523 MIR1238-201ENST00000408483 83 ntBASIC19.93■□□□□ 0.78
CLCN1P35523 MCCD1P1-208ENST00000445732 328 ntBASIC19.93■□□□□ 0.78
CLCN1P35523 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.93■□□□□ 0.78
CLCN1P35523 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.93■□□□□ 0.78
CLCN1P35523 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN1P35523 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN1P35523 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN1P35523 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.93■□□□□ 0.78
CLCN1P35523 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN1P35523 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLCN1P35523 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLCN1P35523 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCN1P35523 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.93■□□□□ 0.78
CLCN1P35523 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CLCN1P35523 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
CLCN1P35523 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.92■□□□□ 0.78
CLCN1P35523 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCN1P35523 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 KRT18P41-201ENST00000518924 1277 ntBASIC19.92■□□□□ 0.78
CLCN1P35523 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCN1P35523 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLCN1P35523 AL353719.1-201ENST00000566847 864 ntBASIC19.92■□□□□ 0.78
CLCN1P35523 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.92■□□□□ 0.78
CLCN1P35523 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.92■□□□□ 0.78
CLCN1P35523 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
CLCN1P35523 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCN1P35523 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCN1P35523 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCN1P35523 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCN1P35523 AC005915.1-201ENST00000624912 2018 ntBASIC19.92■□□□□ 0.78
CLCN1P35523 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CLCN1P35523 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
CLCN1P35523 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.91■□□□□ 0.78
CLCN1P35523 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CLCN1P35523 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.91■□□□□ 0.78
CLCN1P35523 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CLCN1P35523 SLC25A1P2-201ENST00000430693 912 ntBASIC19.91■□□□□ 0.78
CLCN1P35523 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CLCN1P35523 AP003041.3-201ENST00000527151 707 ntBASIC19.91■□□□□ 0.78
CLCN1P35523 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.91■□□□□ 0.78
CLCN1P35523 MYLKP1-201ENST00000509077 1580 ntBASIC19.91■□□□□ 0.78
CLCN1P35523 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCN1P35523 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN1P35523 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CLCN1P35523 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCN1P35523 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLCN1P35523 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms