Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
HOXA6P31267 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HOXA6P31267 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HOXA6P31267 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXA6P31267 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXA6P31267 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXA6P31267 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXA6P31267 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXA6P31267 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXA6P31267 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXA6P31267 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXA6P31267 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXA6P31267 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXA6P31267 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HOXA6P31267 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXA6P31267 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXA6P31267 LINC02560-201ENST00000596379 459 ntBASIC17.13■□□□□ 0.33
HOXA6P31267 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.13■□□□□ 0.33
HOXA6P31267 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
HOXA6P31267 AL358472.5-202ENST00000641448 1267 ntBASIC17.13■□□□□ 0.33
HOXA6P31267 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HOXA6P31267 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HOXA6P31267 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.13■□□□□ 0.33
HOXA6P31267 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HOXA6P31267 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HOXA6P31267 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
HOXA6P31267 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXA6P31267 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXA6P31267 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
HOXA6P31267 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HOXA6P31267 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXA6P31267 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXA6P31267 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA6P31267 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA6P31267 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA6P31267 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXA6P31267 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXA6P31267 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXA6P31267 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXA6P31267 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXA6P31267 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.12■□□□□ 0.33
HOXA6P31267 UGT1A2P-201ENST00000454886 866 ntBASIC17.12■□□□□ 0.33
HOXA6P31267 HLA-J-202ENST00000469281 1241 ntBASIC17.12■□□□□ 0.33
HOXA6P31267 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.12■□□□□ 0.33
HOXA6P31267 AC026150.2-201ENST00000564693 1156 ntBASIC17.12■□□□□ 0.33
HOXA6P31267 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXA6P31267 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HOXA6P31267 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HOXA6P31267 FO538757.1-201ENST00000623083 1397 ntBASIC17.12■□□□□ 0.33
HOXA6P31267 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HOXA6P31267 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXA6P31267 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXA6P31267 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXA6P31267 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA6P31267 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA6P31267 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HOXA6P31267 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA6P31267 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA6P31267 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HOXA6P31267 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXA6P31267 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXA6P31267 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA6P31267 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXA6P31267 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA6P31267 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXA6P31267 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXA6P31267 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXA6P31267 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXA6P31267 IGHV3-62-201ENST00000520057 340 ntBASIC17.11■□□□□ 0.33
HOXA6P31267 AC109635.5-201ENST00000533593 962 ntBASIC17.11■□□□□ 0.33
HOXA6P31267 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXA6P31267 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.11■□□□□ 0.33
HOXA6P31267 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.11■□□□□ 0.33
HOXA6P31267 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA6P31267 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA6P31267 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
HOXA6P31267 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HOXA6P31267 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA6P31267 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HOXA6P31267 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA6P31267 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXA6P31267 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA6P31267 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXA6P31267 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA6P31267 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA6P31267 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA6P31267 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA6P31267 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXA6P31267 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms