Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTR1BP28222 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HTR1BP28222 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
HTR1BP28222 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTR1BP28222 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HTR1BP28222 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.45■□□□□ 0.38
HTR1BP28222 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HTR1BP28222 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HTR1BP28222 PMPCAP1-201ENST00000508114 1576 ntBASIC17.45■□□□□ 0.38
HTR1BP28222 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HTR1BP28222 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.44■□□□□ 0.38
HTR1BP28222 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HTR1BP28222 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
HTR1BP28222 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HTR1BP28222 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HTR1BP28222 AP000347.1-202ENST00000435868 847 ntBASIC17.44■□□□□ 0.38
HTR1BP28222 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.44■□□□□ 0.38
HTR1BP28222 OR7E14P-202ENST00000530490 1290 ntBASIC17.44■□□□□ 0.38
HTR1BP28222 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.44■□□□□ 0.38
HTR1BP28222 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.44■□□□□ 0.38
HTR1BP28222 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.44■□□□□ 0.38
HTR1BP28222 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HTR1BP28222 MTDHP4-201ENST00000600287 670 ntBASIC17.44■□□□□ 0.38
HTR1BP28222 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HTR1BP28222 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.44■□□□□ 0.38
HTR1BP28222 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.44■□□□□ 0.38
HTR1BP28222 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.44■□□□□ 0.38
HTR1BP28222 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HTR1BP28222 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 PKD1P1-201ENST00000458669 6805 ntBASIC17.44■□□□□ 0.38
HTR1BP28222 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1BP28222 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.44■□□□□ 0.38
HTR1BP28222 HLA-J-201ENST00000462773 1622 ntBASIC17.43■□□□□ 0.38
HTR1BP28222 AC079776.2-201ENST00000641154 1609 ntBASIC17.43■□□□□ 0.38
HTR1BP28222 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
HTR1BP28222 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1BP28222 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1BP28222 RPS2P1-201ENST00000434010 821 ntBASIC17.43■□□□□ 0.38
HTR1BP28222 DDX43P3-201ENST00000441064 443 ntBASIC17.43■□□□□ 0.38
HTR1BP28222 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1BP28222 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.43■□□□□ 0.38
HTR1BP28222 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.43■□□□□ 0.38
HTR1BP28222 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
HTR1BP28222 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
HTR1BP28222 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HTR1BP28222 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.43■□□□□ 0.38
HTR1BP28222 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.43■□□□□ 0.38
HTR1BP28222 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.43■□□□□ 0.38
HTR1BP28222 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HTR1BP28222 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.43■□□□□ 0.38
HTR1BP28222 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1BP28222 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.42■□□□□ 0.38
HTR1BP28222 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR1BP28222 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HTR1BP28222 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1BP28222 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
HTR1BP28222 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1BP28222 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.42■□□□□ 0.38
HTR1BP28222 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1BP28222 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HTR1BP28222 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HTR1BP28222 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1BP28222 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1BP28222 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.42■□□□□ 0.38
HTR1BP28222 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR1BP28222 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HTR1BP28222 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HTR1BP28222 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HTR1BP28222 HNRNPDP1-201ENST00000439535 754 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms