Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.81■□□□□ 0.28
PTX3P26022 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PTX3P26022 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTX3P26022 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTX3P26022 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTX3P26022 CROCCP2-202ENST00000412962 2773 ntBASIC16.81■□□□□ 0.28
PTX3P26022 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PTX3P26022 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTX3P26022 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.8■□□□□ 0.28
PTX3P26022 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
PTX3P26022 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.8■□□□□ 0.28
PTX3P26022 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.8■□□□□ 0.28
PTX3P26022 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.8■□□□□ 0.28
PTX3P26022 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTX3P26022 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.8■□□□□ 0.28
PTX3P26022 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 KRT17P6-201ENST00000453795 1220 ntBASIC16.8■□□□□ 0.28
PTX3P26022 MINOS1P3-201ENST00000457048 203 ntBASIC16.8■□□□□ 0.28
PTX3P26022 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.8■□□□□ 0.28
PTX3P26022 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.8■□□□□ 0.28
PTX3P26022 AC091607.1-201ENST00000490318 1060 ntBASIC16.8■□□□□ 0.28
PTX3P26022 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.8■□□□□ 0.28
PTX3P26022 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.8■□□□□ 0.28
PTX3P26022 AC111152.3-201ENST00000569699 673 ntBASIC16.8■□□□□ 0.28
PTX3P26022 AC109462.3-201ENST00000573934 613 ntBASIC16.8■□□□□ 0.28
PTX3P26022 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
PTX3P26022 AP005901.3-202ENST00000581653 237 ntBASIC16.8■□□□□ 0.28
PTX3P26022 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTX3P26022 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.8■□□□□ 0.28
PTX3P26022 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTX3P26022 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.8■□□□□ 0.28
PTX3P26022 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PTX3P26022 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTX3P26022 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTX3P26022 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PTX3P26022 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.79■□□□□ 0.28
PTX3P26022 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTX3P26022 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.79■□□□□ 0.28
PTX3P26022 TOB2P1-201ENST00000469761 992 ntBASIC16.79■□□□□ 0.28
PTX3P26022 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.79■□□□□ 0.28
PTX3P26022 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.79■□□□□ 0.28
PTX3P26022 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PTX3P26022 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 AC011467.2-201ENST00000598425 242 ntBASIC16.79■□□□□ 0.28
PTX3P26022 AC019129.2-201ENST00000609837 1235 ntBASIC16.79■□□□□ 0.28
PTX3P26022 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
PTX3P26022 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.79■□□□□ 0.28
PTX3P26022 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTX3P26022 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PTX3P26022 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.78■□□□□ 0.28
PTX3P26022 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.78■□□□□ 0.28
PTX3P26022 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.78■□□□□ 0.28
PTX3P26022 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PTX3P26022 LINC00265-3P-201ENST00000447588 903 ntBASIC16.78■□□□□ 0.28
PTX3P26022 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.78■□□□□ 0.28
PTX3P26022 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.78■□□□□ 0.28
PTX3P26022 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.78■□□□□ 0.28
PTX3P26022 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PTX3P26022 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PTX3P26022 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PTX3P26022 TP73-AS1-210ENST00000637775 1455 ntBASIC16.78■□□□□ 0.28
PTX3P26022 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PTX3P26022 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PTX3P26022 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms