Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.39■□□□□ 0.21
CHMP24386 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.39■□□□□ 0.21
CHMP24386 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHMP24386 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP24386 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP24386 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHMP24386 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP24386 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP24386 LINC00304-203ENST00000565008 1864 ntBASIC16.38■□□□□ 0.21
CHMP24386 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CHMP24386 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP24386 AL118508.1-201ENST00000613502 2345 ntBASIC16.38■□□□□ 0.21
CHMP24386 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHMP24386 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CHMP24386 AP002383.4-201ENST00000442518 975 ntBASIC16.38■□□□□ 0.21
CHMP24386 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP24386 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP24386 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.38■□□□□ 0.21
CHMP24386 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHMP24386 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.38■□□□□ 0.21
CHMP24386 KRT18P1-202ENST00000452408 1331 ntBASIC16.38■□□□□ 0.21
CHMP24386 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHMP24386 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.38■□□□□ 0.21
CHMP24386 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.38■□□□□ 0.21
CHMP24386 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.38■□□□□ 0.21
CHMP24386 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHMP24386 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CHMP24386 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.37■□□□□ 0.21
CHMP24386 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.37■□□□□ 0.21
CHMP24386 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP24386 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHMP24386 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CHMP24386 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP24386 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.37■□□□□ 0.21
CHMP24386 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.37■□□□□ 0.21
CHMP24386 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.37■□□□□ 0.21
CHMP24386 DRAXINP1-201ENST00000437611 948 ntBASIC16.37■□□□□ 0.21
CHMP24386 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP24386 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP24386 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.37■□□□□ 0.21
CHMP24386 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CHMP24386 MIR3180-1-201ENST00000580374 94 ntBASIC16.37■□□□□ 0.21
CHMP24386 MIR3180-3-201ENST00000584616 94 ntBASIC16.37■□□□□ 0.21
CHMP24386 AP002414.4-201ENST00000589764 1148 ntBASIC16.37■□□□□ 0.21
CHMP24386 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.37■□□□□ 0.21
CHMP24386 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.37■□□□□ 0.21
CHMP24386 AC011270.2-201ENST00000624293 2550 ntBASIC16.37■□□□□ 0.21
CHMP24386 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP24386 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.37■□□□□ 0.21
CHMP24386 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP24386 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHMP24386 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP24386 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CHMP24386 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP24386 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP24386 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CHMP24386 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP24386 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms