Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL11A2P13942 UXT-AS1-201ENST00000590504 1525 ntBASIC21.15■□□□□ 0.98
COL11A2P13942 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL11A2P13942 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
COL11A2P13942 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.15■□□□□ 0.98
COL11A2P13942 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COL11A2P13942 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.15■□□□□ 0.98
COL11A2P13942 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.15■□□□□ 0.98
COL11A2P13942 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.15■□□□□ 0.98
COL11A2P13942 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
COL11A2P13942 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.15■□□□□ 0.98
COL11A2P13942 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL11A2P13942 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.15■□□□□ 0.98
COL11A2P13942 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
COL11A2P13942 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL11A2P13942 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL11A2P13942 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL11A2P13942 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL11A2P13942 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL11A2P13942 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
COL11A2P13942 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.14■□□□□ 0.97
COL11A2P13942 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL11A2P13942 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.14■□□□□ 0.97
COL11A2P13942 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.14■□□□□ 0.97
COL11A2P13942 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.97
COL11A2P13942 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.14■□□□□ 0.97
COL11A2P13942 MIR4515-201ENST00000584082 81 ntBASIC21.14■□□□□ 0.97
COL11A2P13942 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL11A2P13942 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL11A2P13942 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.14■□□□□ 0.97
COL11A2P13942 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
COL11A2P13942 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL11A2P13942 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.14■□□□□ 0.97
COL11A2P13942 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL11A2P13942 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.13■□□□□ 0.97
COL11A2P13942 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.13■□□□□ 0.97
COL11A2P13942 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL11A2P13942 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.13■□□□□ 0.97
COL11A2P13942 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.13■□□□□ 0.97
COL11A2P13942 RN7SL692P-201ENST00000464677 288 ntBASIC21.13■□□□□ 0.97
COL11A2P13942 LINC01225-203ENST00000563550 1244 ntBASIC21.13■□□□□ 0.97
COL11A2P13942 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL11A2P13942 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.13■□□□□ 0.97
COL11A2P13942 AC063926.2-201ENST00000623766 1308 ntBASIC21.13■□□□□ 0.97
COL11A2P13942 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL11A2P13942 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.13■□□□□ 0.97
COL11A2P13942 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.13■□□□□ 0.97
COL11A2P13942 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
COL11A2P13942 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL11A2P13942 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.12■□□□□ 0.97
COL11A2P13942 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
COL11A2P13942 COX5BP8-201ENST00000416911 349 ntBASIC21.12■□□□□ 0.97
COL11A2P13942 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.12■□□□□ 0.97
COL11A2P13942 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.12■□□□□ 0.97
COL11A2P13942 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL11A2P13942 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.12■□□□□ 0.97
COL11A2P13942 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.12■□□□□ 0.97
COL11A2P13942 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
COL11A2P13942 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.12■□□□□ 0.97
COL11A2P13942 AL161645.1-201ENST00000622716 1255 ntBASIC21.12■□□□□ 0.97
COL11A2P13942 AC025048.6-201ENST00000634326 1161 ntBASIC21.12■□□□□ 0.97
COL11A2P13942 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.12■□□□□ 0.97
COL11A2P13942 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL11A2P13942 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COL11A2P13942 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COL11A2P13942 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
COL11A2P13942 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL11A2P13942 KRT18P55-202ENST00000578578 1546 ntBASIC21.12■□□□□ 0.97
COL11A2P13942 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL11A2P13942 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL11A2P13942 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL11A2P13942 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.12■□□□□ 0.97
COL11A2P13942 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.12■□□□□ 0.97
COL11A2P13942 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COL11A2P13942 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL11A2P13942 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL11A2P13942 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL11A2P13942 TSSK5P-201ENST00000423978 907 ntBASIC21.12■□□□□ 0.97
COL11A2P13942 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.12■□□□□ 0.97
COL11A2P13942 AC097493.3-201ENST00000509725 367 ntBASIC21.12■□□□□ 0.97
COL11A2P13942 ALG1L8P-201ENST00000533887 760 ntBASIC21.12■□□□□ 0.97
COL11A2P13942 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.12■□□□□ 0.97
COL11A2P13942 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL11A2P13942 WASH6P-202ENST00000359512 1437 ntBASIC21.12■□□□□ 0.97
COL11A2P13942 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.12■□□□□ 0.97
COL11A2P13942 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.11■□□□□ 0.97
COL11A2P13942 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.11■□□□□ 0.97
COL11A2P13942 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.11■□□□□ 0.97
COL11A2P13942 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
COL11A2P13942 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL11A2P13942 SPDYE7P-202ENST00000420373 878 ntBASIC21.11■□□□□ 0.97
COL11A2P13942 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms