Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC30.26■■■□□ 2.43
TOP2AP11388 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC30.26■■■□□ 2.43
TOP2AP11388 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC30.26■■■□□ 2.43
TOP2AP11388 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC30.26■■■□□ 2.43
TOP2AP11388 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOP2AP11388 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TOP2AP11388 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
TOP2AP11388 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TOP2AP11388 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC30.25■■■□□ 2.43
TOP2AP11388 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC30.25■■■□□ 2.43
TOP2AP11388 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
TOP2AP11388 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TOP2AP11388 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TOP2AP11388 HNRNPFP1-201ENST00000391730 1133 ntBASIC30.25■■■□□ 2.43
TOP2AP11388 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC30.25■■■□□ 2.43
TOP2AP11388 AC055876.3-201ENST00000431496 288 ntBASIC30.25■■■□□ 2.43
TOP2AP11388 LINC01225-203ENST00000563550 1244 ntBASIC30.25■■■□□ 2.43
TOP2AP11388 AC138649.4-201ENST00000612222 287 ntBASIC30.25■■■□□ 2.43
TOP2AP11388 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
TOP2AP11388 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
TOP2AP11388 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC30.25■■■□□ 2.43
TOP2AP11388 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
TOP2AP11388 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOP2AP11388 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
TOP2AP11388 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC30.24■■■□□ 2.43
TOP2AP11388 SLC25A1P3-201ENST00000395415 828 ntBASIC30.24■■■□□ 2.43
TOP2AP11388 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOP2AP11388 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC30.24■■■□□ 2.43
TOP2AP11388 POLD4-211ENST00000539074 714 ntTSL 3 BASIC30.24■■■□□ 2.43
TOP2AP11388 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TOP2AP11388 AC140878.1-201ENST00000565277 250 ntBASIC30.24■■■□□ 2.43
TOP2AP11388 MIR3909-201ENST00000579518 119 ntBASIC30.24■■■□□ 2.43
TOP2AP11388 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOP2AP11388 AC138028.4-201ENST00000564984 1845 ntBASIC30.24■■■□□ 2.43
TOP2AP11388 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC30.24■■■□□ 2.43
TOP2AP11388 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
TOP2AP11388 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
TOP2AP11388 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TOP2AP11388 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
TOP2AP11388 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
TOP2AP11388 VMA21-202ENST00000370361 693 ntTSL 5 BASIC30.23■■■□□ 2.43
TOP2AP11388 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC30.23■■■□□ 2.43
TOP2AP11388 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC30.23■■■□□ 2.43
TOP2AP11388 CENPM-205ENST00000404067 905 ntTSL 3 BASIC30.23■■■□□ 2.43
TOP2AP11388 AC107890.1-201ENST00000422478 521 ntBASIC30.23■■■□□ 2.43
TOP2AP11388 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC30.23■■■□□ 2.43
TOP2AP11388 AL158211.3-201ENST00000607385 239 ntBASIC30.23■■■□□ 2.43
TOP2AP11388 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC30.23■■■□□ 2.43
TOP2AP11388 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC30.23■■■□□ 2.43
TOP2AP11388 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TOP2AP11388 TNXA-203ENST00000507684 2038 ntBASIC30.23■■■□□ 2.43
TOP2AP11388 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
TOP2AP11388 TUBB3P1-201ENST00000405796 1332 ntBASIC30.23■■■□□ 2.43
TOP2AP11388 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TOP2AP11388 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC30.23■■■□□ 2.43
TOP2AP11388 LYSMD4-203ENST00000378904 2122 ntBASIC30.22■■■□□ 2.43
TOP2AP11388 BAD-202ENST00000394531 631 ntTSL 3 BASIC30.22■■■□□ 2.43
TOP2AP11388 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 BAD-207ENST00000544785 525 ntTSL 3 BASIC30.22■■■□□ 2.43
TOP2AP11388 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC30.22■■■□□ 2.43
TOP2AP11388 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC30.22■■■□□ 2.43
TOP2AP11388 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC30.22■■■□□ 2.43
TOP2AP11388 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
TOP2AP11388 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
TOP2AP11388 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
TOP2AP11388 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC30.22■■■□□ 2.43
TOP2AP11388 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC30.22■■■□□ 2.43
TOP2AP11388 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC30.22■■■□□ 2.43
TOP2AP11388 GATD1-206ENST00000526325 756 ntTSL 5 BASIC30.22■■■□□ 2.43
TOP2AP11388 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC30.22■■■□□ 2.43
TOP2AP11388 RBM7-207ENST00000544582 692 ntTSL 3 BASIC30.22■■■□□ 2.43
TOP2AP11388 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TOP2AP11388 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC30.22■■■□□ 2.43
TOP2AP11388 AL161645.1-201ENST00000622716 1255 ntBASIC30.22■■■□□ 2.43
TOP2AP11388 AF228730.6-201ENST00000641497 218 ntBASIC30.22■■■□□ 2.43
TOP2AP11388 AC084121.3-201ENST00000641716 218 ntBASIC30.22■■■□□ 2.43
TOP2AP11388 AC105233.6-201ENST00000642093 218 ntBASIC30.22■■■□□ 2.43
TOP2AP11388 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
TOP2AP11388 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
TOP2AP11388 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC30.21■■■□□ 2.43
TOP2AP11388 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
TOP2AP11388 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
TOP2AP11388 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
TOP2AP11388 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
TOP2AP11388 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
TOP2AP11388 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC30.21■■■□□ 2.43
TOP2AP11388 TAF8-206ENST00000472818 719 ntTSL 2 BASIC30.21■■■□□ 2.43
TOP2AP11388 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC30.21■■■□□ 2.43
TOP2AP11388 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
TOP2AP11388 AC012645.4-201ENST00000610691 1061 ntBASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms