Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 AL589182.2-201ENST00000619332 1049 ntBASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SRGAP2CP0DJJ0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 MIR574-201ENST00000385209 96 ntBASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 AC106730.1-201ENST00000566722 1090 ntBASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 AL671883.3-201ENST00000603274 991 ntBASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 AC097637.2-201ENST00000624096 1997 ntBASIC19.23■□□□□ 0.67
SRGAP2CP0DJJ0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 MIR940-201ENST00000401276 94 ntBASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 RNA5SP415-201ENST00000517246 115 ntBASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 AC006557.2-201ENST00000592985 1240 ntBASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 AL356488.2-201ENST00000602755 427 ntBASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 AC104109.2-201ENST00000602919 1418 ntBASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRGAP2CP0DJJ0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.21■□□□□ 0.67
SRGAP2CP0DJJ0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SRGAP2CP0DJJ0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms