Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC175P0C221 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC175P0C221 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC175P0C221 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC175P0C221 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC175P0C221 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC175P0C221 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC175P0C221 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC175P0C221 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC175P0C221 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC175P0C221 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC175P0C221 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC175P0C221 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC175P0C221 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC175P0C221 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC175P0C221 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC175P0C221 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC175P0C221 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC175P0C221 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC175P0C221 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC175P0C221 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC175P0C221 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC175P0C221 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC175P0C221 AC026471.5-201ENST00000615068 467 ntBASIC18.92■□□□□ 0.62
CCDC175P0C221 AC010653.2-201ENST00000623505 997 ntBASIC18.92■□□□□ 0.62
CCDC175P0C221 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC175P0C221 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC175P0C221 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC175P0C221 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC175P0C221 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CCDC175P0C221 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC175P0C221 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC175P0C221 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC175P0C221 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCDC175P0C221 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC175P0C221 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC175P0C221 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC175P0C221 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC175P0C221 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC175P0C221 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC175P0C221 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC175P0C221 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC175P0C221 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC175P0C221 AC012618.2-201ENST00000428058 849 ntBASIC18.91■□□□□ 0.62
CCDC175P0C221 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 MIR4651-201ENST00000582622 73 ntBASIC18.91■□□□□ 0.62
CCDC175P0C221 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC175P0C221 AL139327.4-201ENST00000612362 153 ntBASIC18.91■□□□□ 0.62
CCDC175P0C221 AL049637.2-201ENST00000641778 930 ntBASIC18.91■□□□□ 0.62
CCDC175P0C221 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC175P0C221 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CCDC175P0C221 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CCDC175P0C221 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC175P0C221 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC175P0C221 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC175P0C221 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC175P0C221 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC175P0C221 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC175P0C221 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC175P0C221 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC175P0C221 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 UNC93B2-201ENST00000285383 730 ntBASIC18.9■□□□□ 0.62
CCDC175P0C221 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC175P0C221 CD99P1-205ENST00000527459 561 ntBASIC18.9■□□□□ 0.62
CCDC175P0C221 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC175P0C221 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC175P0C221 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC175P0C221 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC175P0C221 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC175P0C221 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC175P0C221 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms