Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC063926.2-201ENST00000623766 1308 ntBASIC18.39■□□□□ 0.53
RB1P06400 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RB1P06400 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RB1P06400 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.39■□□□□ 0.53
RB1P06400 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
RB1P06400 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RB1P06400 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RB1P06400 RNF165-205ENST00000588679 2904 ntBASIC18.39■□□□□ 0.53
RB1P06400 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.39■□□□□ 0.53
RB1P06400 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.38■□□□□ 0.53
RB1P06400 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 AC093677.2-201ENST00000600169 1863 ntBASIC18.38■□□□□ 0.53
RB1P06400 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.38■□□□□ 0.53
RB1P06400 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.38■□□□□ 0.53
RB1P06400 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.38■□□□□ 0.53
RB1P06400 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.38■□□□□ 0.53
RB1P06400 KRT8P48-201ENST00000515599 1220 ntBASIC18.38■□□□□ 0.53
RB1P06400 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.38■□□□□ 0.53
RB1P06400 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.38■□□□□ 0.53
RB1P06400 AC051619.7-201ENST00000568314 623 ntBASIC18.38■□□□□ 0.53
RB1P06400 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RB1P06400 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
RB1P06400 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.38■□□□□ 0.53
RB1P06400 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.38■□□□□ 0.53
RB1P06400 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.38■□□□□ 0.53
RB1P06400 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RB1P06400 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.38■□□□□ 0.53
RB1P06400 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RB1P06400 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
RB1P06400 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.38■□□□□ 0.53
RB1P06400 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RB1P06400 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RB1P06400 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RB1P06400 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.37■□□□□ 0.53
RB1P06400 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RB1P06400 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.37■□□□□ 0.53
RB1P06400 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.37■□□□□ 0.53
RB1P06400 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.37■□□□□ 0.53
RB1P06400 AP001059.3-201ENST00000619053 235 ntBASIC18.37■□□□□ 0.53
RB1P06400 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.37■□□□□ 0.53
RB1P06400 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.37■□□□□ 0.53
RB1P06400 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.37■□□□□ 0.53
RB1P06400 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.37■□□□□ 0.53
RB1P06400 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.37■□□□□ 0.53
RB1P06400 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RB1P06400 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.37■□□□□ 0.53
RB1P06400 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.37■□□□□ 0.53
RB1P06400 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RB1P06400 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
RB1P06400 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.36■□□□□ 0.53
RB1P06400 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.36■□□□□ 0.53
RB1P06400 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 TFAMP1-201ENST00000412727 736 ntBASIC18.36■□□□□ 0.53
RB1P06400 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.36■□□□□ 0.53
RB1P06400 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 AKAP8P1-201ENST00000434743 1349 ntBASIC18.36■□□□□ 0.53
RB1P06400 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.36■□□□□ 0.53
RB1P06400 AC087163.2-201ENST00000457299 853 ntBASIC18.36■□□□□ 0.53
RB1P06400 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 SLC25A6P2-201ENST00000497974 877 ntBASIC18.36■□□□□ 0.53
RB1P06400 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.36■□□□□ 0.53
RB1P06400 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms