Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRUB2O95900 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.34■□□□□ 0.53
TRUB2O95900 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.34■□□□□ 0.53
TRUB2O95900 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TRUB2O95900 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRUB2O95900 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
TRUB2O95900 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRUB2O95900 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TRUB2O95900 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.33■□□□□ 0.53
TRUB2O95900 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRUB2O95900 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRUB2O95900 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRUB2O95900 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TRUB2O95900 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
TRUB2O95900 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB2O95900 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TRUB2O95900 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB2O95900 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB2O95900 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB2O95900 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.33■□□□□ 0.52
TRUB2O95900 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.33■□□□□ 0.52
TRUB2O95900 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB2O95900 AL139327.4-201ENST00000612362 153 ntBASIC18.33■□□□□ 0.52
TRUB2O95900 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.33■□□□□ 0.52
TRUB2O95900 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB2O95900 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TRUB2O95900 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.33■□□□□ 0.52
TRUB2O95900 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB2O95900 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB2O95900 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.33■□□□□ 0.52
TRUB2O95900 AL353593.2-201ENST00000602529 1483 ntBASIC18.33■□□□□ 0.52
TRUB2O95900 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRUB2O95900 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.32■□□□□ 0.52
TRUB2O95900 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.32■□□□□ 0.52
TRUB2O95900 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TRUB2O95900 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRUB2O95900 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.32■□□□□ 0.52
TRUB2O95900 EMBP1-201ENST00000458200 901 ntBASIC18.32■□□□□ 0.52
TRUB2O95900 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.32■□□□□ 0.52
TRUB2O95900 AC106795.1-205ENST00000512851 1056 ntBASIC18.32■□□□□ 0.52
TRUB2O95900 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.32■□□□□ 0.52
TRUB2O95900 IGHV3-52-201ENST00000519770 353 ntBASIC18.32■□□□□ 0.52
TRUB2O95900 RN7SL510P-201ENST00000581311 263 ntBASIC18.32■□□□□ 0.52
TRUB2O95900 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 AP000867.4-201ENST00000641616 219 ntBASIC18.32■□□□□ 0.52
TRUB2O95900 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
TRUB2O95900 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.32■□□□□ 0.52
TRUB2O95900 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.32■□□□□ 0.52
TRUB2O95900 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.32■□□□□ 0.52
TRUB2O95900 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.32■□□□□ 0.52
TRUB2O95900 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRUB2O95900 AP005117.1-201ENST00000584346 1413 ntBASIC18.32■□□□□ 0.52
TRUB2O95900 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRUB2O95900 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.31■□□□□ 0.52
TRUB2O95900 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRUB2O95900 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRUB2O95900 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.31■□□□□ 0.52
TRUB2O95900 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.31■□□□□ 0.52
TRUB2O95900 PMPCAP1-201ENST00000508114 1576 ntBASIC18.31■□□□□ 0.52
TRUB2O95900 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.31■□□□□ 0.52
TRUB2O95900 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TRUB2O95900 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.31■□□□□ 0.52
TRUB2O95900 SAPCD2P3-201ENST00000455031 850 ntBASIC18.31■□□□□ 0.52
TRUB2O95900 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.31■□□□□ 0.52
TRUB2O95900 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TRUB2O95900 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.31■□□□□ 0.52
TRUB2O95900 AL691432.3-201ENST00000621860 400 ntBASIC18.31■□□□□ 0.52
TRUB2O95900 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.31■□□□□ 0.52
TRUB2O95900 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.31■□□□□ 0.52
TRUB2O95900 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRUB2O95900 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms