Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLSTN1O94985 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLSTN1O94985 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLSTN1O94985 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.41■□□□□ 0.7
CLSTN1O94985 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.41■□□□□ 0.7
CLSTN1O94985 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.41■□□□□ 0.7
CLSTN1O94985 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.41■□□□□ 0.7
CLSTN1O94985 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 KRT18P1-202ENST00000452408 1331 ntBASIC19.41■□□□□ 0.7
CLSTN1O94985 AC022898.2-201ENST00000616822 1312 ntBASIC19.41■□□□□ 0.7
CLSTN1O94985 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLSTN1O94985 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 LINC00167-201ENST00000530583 1419 ntBASIC19.41■□□□□ 0.7
CLSTN1O94985 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.41■□□□□ 0.7
CLSTN1O94985 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLSTN1O94985 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLSTN1O94985 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLSTN1O94985 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.4■□□□□ 0.7
CLSTN1O94985 AC009053.2-201ENST00000563701 2365 ntBASIC19.4■□□□□ 0.7
CLSTN1O94985 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLSTN1O94985 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.4■□□□□ 0.7
CLSTN1O94985 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.4■□□□□ 0.7
CLSTN1O94985 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CLSTN1O94985 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 KRT8P26-201ENST00000534154 1276 ntBASIC19.4■□□□□ 0.7
CLSTN1O94985 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CLSTN1O94985 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.4■□□□□ 0.7
CLSTN1O94985 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.4■□□□□ 0.7
CLSTN1O94985 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLSTN1O94985 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLSTN1O94985 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.4■□□□□ 0.7
CLSTN1O94985 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.4■□□□□ 0.7
CLSTN1O94985 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLSTN1O94985 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CLSTN1O94985 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CLSTN1O94985 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.39■□□□□ 0.69
CLSTN1O94985 AC012317.2-201ENST00000623305 2251 ntBASIC19.39■□□□□ 0.69
CLSTN1O94985 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.39■□□□□ 0.69
CLSTN1O94985 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 TSSC2-201ENST00000450217 709 ntBASIC19.39■□□□□ 0.69
CLSTN1O94985 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.39■□□□□ 0.69
CLSTN1O94985 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.39■□□□□ 0.69
CLSTN1O94985 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 AC116407.4-201ENST00000623319 1061 ntBASIC19.39■□□□□ 0.69
CLSTN1O94985 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLSTN1O94985 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLSTN1O94985 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLSTN1O94985 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLSTN1O94985 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CLSTN1O94985 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms