Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
GPC4O75487 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
GPC4O75487 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 PP12613-201ENST00000424958 2230 ntBASIC17.57■□□□□ 0.4
GPC4O75487 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
GPC4O75487 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 KRT8P47-201ENST00000604727 1398 ntBASIC17.57■□□□□ 0.4
GPC4O75487 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC4O75487 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC4O75487 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
GPC4O75487 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
GPC4O75487 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.57■□□□□ 0.4
GPC4O75487 CHCHD2P8-201ENST00000429873 447 ntBASIC17.57■□□□□ 0.4
GPC4O75487 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
GPC4O75487 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC4O75487 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 IGHV3-41-201ENST00000613121 348 ntBASIC17.57■□□□□ 0.4
GPC4O75487 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC4O75487 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.57■□□□□ 0.4
GPC4O75487 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.57■□□□□ 0.4
GPC4O75487 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 AL023806.1-201ENST00000603994 1649 ntBASIC17.57■□□□□ 0.4
GPC4O75487 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
GPC4O75487 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 AC080080.1-201ENST00000625121 2420 ntBASIC17.57■□□□□ 0.4
GPC4O75487 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GPC4O75487 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
GPC4O75487 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
GPC4O75487 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC4O75487 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.56■□□□□ 0.4
GPC4O75487 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.56■□□□□ 0.4
GPC4O75487 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC4O75487 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GPC4O75487 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 TSSC2-201ENST00000450217 709 ntBASIC17.56■□□□□ 0.4
GPC4O75487 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.56■□□□□ 0.4
GPC4O75487 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.56■□□□□ 0.4
GPC4O75487 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GPC4O75487 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.56■□□□□ 0.4
GPC4O75487 AC124864.1-201ENST00000623408 392 ntBASIC17.56■□□□□ 0.4
GPC4O75487 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.56■□□□□ 0.4
GPC4O75487 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
GPC4O75487 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
GPC4O75487 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GPC4O75487 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.56■□□□□ 0.4
GPC4O75487 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.56■□□□□ 0.4
GPC4O75487 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.55■□□□□ 0.4
GPC4O75487 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GPC4O75487 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.55■□□□□ 0.4
GPC4O75487 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.55■□□□□ 0.4
GPC4O75487 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
GPC4O75487 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.55■□□□□ 0.4
GPC4O75487 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 AL845331.1-201ENST00000424978 1190 ntBASIC17.55■□□□□ 0.4
GPC4O75487 AP002383.4-201ENST00000442518 975 ntBASIC17.55■□□□□ 0.4
GPC4O75487 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.55■□□□□ 0.4
GPC4O75487 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.55■□□□□ 0.4
GPC4O75487 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GPC4O75487 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms