Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.21■□□□□ 0.51
LRCH4O75427 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCH4O75427 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
LRCH4O75427 HCG11-201ENST00000411553 5696 ntBASIC18.21■□□□□ 0.5
LRCH4O75427 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRCH4O75427 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH4O75427 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRCH4O75427 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.2■□□□□ 0.5
LRCH4O75427 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.2■□□□□ 0.5
LRCH4O75427 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.2■□□□□ 0.5
LRCH4O75427 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LRCH4O75427 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.2■□□□□ 0.5
LRCH4O75427 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.2■□□□□ 0.5
LRCH4O75427 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.2■□□□□ 0.5
LRCH4O75427 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCH4O75427 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH4O75427 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH4O75427 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
LRCH4O75427 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH4O75427 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH4O75427 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
LRCH4O75427 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH4O75427 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.19■□□□□ 0.5
LRCH4O75427 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH4O75427 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH4O75427 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.19■□□□□ 0.5
LRCH4O75427 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.19■□□□□ 0.5
LRCH4O75427 PRORSD1P-202ENST00000563365 2154 ntBASIC18.19■□□□□ 0.5
LRCH4O75427 AC009336.1-201ENST00000608941 1553 ntBASIC18.19■□□□□ 0.5
LRCH4O75427 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH4O75427 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.19■□□□□ 0.5
LRCH4O75427 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH4O75427 AC093525.9-201ENST00000624961 1746 ntBASIC18.19■□□□□ 0.5
LRCH4O75427 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.19■□□□□ 0.5
LRCH4O75427 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH4O75427 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH4O75427 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LRCH4O75427 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH4O75427 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH4O75427 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.19■□□□□ 0.5
LRCH4O75427 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
LRCH4O75427 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
LRCH4O75427 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH4O75427 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LRCH4O75427 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH4O75427 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH4O75427 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRCH4O75427 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRCH4O75427 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LRCH4O75427 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRCH4O75427 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.18■□□□□ 0.5
LRCH4O75427 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH4O75427 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH4O75427 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH4O75427 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LRCH4O75427 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRCH4O75427 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.18■□□□□ 0.5
LRCH4O75427 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRCH4O75427 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH4O75427 AC003669.1-201ENST00000334569 611 ntBASIC18.18■□□□□ 0.5
LRCH4O75427 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.18■□□□□ 0.5
LRCH4O75427 POM121L3P-201ENST00000419331 1163 ntBASIC18.18■□□□□ 0.5
LRCH4O75427 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.18■□□□□ 0.5
LRCH4O75427 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRCH4O75427 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.18■□□□□ 0.5
LRCH4O75427 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.18■□□□□ 0.5
LRCH4O75427 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH4O75427 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
LRCH4O75427 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.18■□□□□ 0.5
LRCH4O75427 AC099336.1-202ENST00000602961 463 ntBASIC18.18■□□□□ 0.5
LRCH4O75427 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.18■□□□□ 0.5
LRCH4O75427 AC073592.5-201ENST00000624854 528 ntBASIC18.18■□□□□ 0.5
LRCH4O75427 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH4O75427 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH4O75427 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCH4O75427 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH4O75427 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH4O75427 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms