Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 MTDHP4-201ENST00000600287 670 ntBASIC17.73■□□□□ 0.43
PRAMEF11O60813 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.73■□□□□ 0.43
PRAMEF11O60813 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEF11O60813 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 HTR7P1-202ENST00000624664 4411 ntBASIC17.72■□□□□ 0.43
PRAMEF11O60813 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 FAM197Y8-203ENST00000450145 560 ntBASIC17.72■□□□□ 0.43
PRAMEF11O60813 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 AP002469.2-201ENST00000531724 424 ntBASIC17.72■□□□□ 0.43
PRAMEF11O60813 AL160237.2-201ENST00000556165 472 ntBASIC17.72■□□□□ 0.43
PRAMEF11O60813 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 AL121894.2-201ENST00000602977 491 ntBASIC17.72■□□□□ 0.43
PRAMEF11O60813 AC025062.2-201ENST00000605477 670 ntBASIC17.72■□□□□ 0.43
PRAMEF11O60813 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF11O60813 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 CROCCP2-202ENST00000412962 2773 ntBASIC17.72■□□□□ 0.43
PRAMEF11O60813 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF11O60813 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF11O60813 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF11O60813 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF11O60813 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF11O60813 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF11O60813 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF11O60813 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF11O60813 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF11O60813 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF11O60813 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF11O60813 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEF11O60813 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF11O60813 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
PRAMEF11O60813 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
PRAMEF11O60813 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF11O60813 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF11O60813 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 RNPS1P1-201ENST00000507437 918 ntBASIC17.7■□□□□ 0.42
PRAMEF11O60813 AC073648.2-201ENST00000510116 352 ntBASIC17.7■□□□□ 0.42
PRAMEF11O60813 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PRAMEF11O60813 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms