Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.12■□□□□ 0.33
PEX1O43933 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PEX1O43933 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.12■□□□□ 0.33
PEX1O43933 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 PCED1CP-201ENST00000419887 785 ntBASIC17.12■□□□□ 0.33
PEX1O43933 UPK3BP1-201ENST00000428678 509 ntBASIC17.12■□□□□ 0.33
PEX1O43933 FAM86EP-206ENST00000510506 987 ntBASIC17.12■□□□□ 0.33
PEX1O43933 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.12■□□□□ 0.33
PEX1O43933 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.12■□□□□ 0.33
PEX1O43933 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.12■□□□□ 0.33
PEX1O43933 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PEX1O43933 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
PEX1O43933 AC024243.1-201ENST00000609234 778 ntBASIC17.12■□□□□ 0.33
PEX1O43933 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 AP000550.4-202ENST00000639755 178 ntBASIC17.12■□□□□ 0.33
PEX1O43933 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 AC133963.1-201ENST00000504166 1679 ntBASIC17.12■□□□□ 0.33
PEX1O43933 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.12■□□□□ 0.33
PEX1O43933 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.12■□□□□ 0.33
PEX1O43933 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PEX1O43933 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PEX1O43933 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.11■□□□□ 0.33
PEX1O43933 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PEX1O43933 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
PEX1O43933 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.11■□□□□ 0.33
PEX1O43933 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 AC034232.1-201ENST00000506026 1064 ntBASIC17.11■□□□□ 0.33
PEX1O43933 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.11■□□□□ 0.33
PEX1O43933 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PEX1O43933 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PEX1O43933 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.11■□□□□ 0.33
PEX1O43933 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.11■□□□□ 0.33
PEX1O43933 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 FER1L4-210ENST00000615531 5998 ntBASIC17.11■□□□□ 0.33
PEX1O43933 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.11■□□□□ 0.33
PEX1O43933 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.11■□□□□ 0.33
PEX1O43933 RCC2P3-201ENST00000418112 1537 ntBASIC17.11■□□□□ 0.33
PEX1O43933 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PEX1O43933 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PEX1O43933 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PEX1O43933 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.1■□□□□ 0.33
PEX1O43933 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.1■□□□□ 0.33
PEX1O43933 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.1■□□□□ 0.33
PEX1O43933 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.1■□□□□ 0.33
PEX1O43933 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.1■□□□□ 0.33
PEX1O43933 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 SPDYE15P-201ENST00000424157 909 ntBASIC17.1■□□□□ 0.33
PEX1O43933 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.1■□□□□ 0.33
PEX1O43933 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.1■□□□□ 0.33
PEX1O43933 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.1■□□□□ 0.33
PEX1O43933 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.1■□□□□ 0.33
PEX1O43933 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.1■□□□□ 0.33
PEX1O43933 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.1■□□□□ 0.33
PEX1O43933 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.1■□□□□ 0.33
PEX1O43933 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.1■□□□□ 0.33
PEX1O43933 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.1■□□□□ 0.33
PEX1O43933 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PEX1O43933 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PEX1O43933 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.1■□□□□ 0.33
PEX1O43933 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PEX1O43933 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms