Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.99■□□□□ 0.31
UBFD1O14562 AC104076.2-201ENST00000448912 469 ntBASIC16.99■□□□□ 0.31
UBFD1O14562 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UBFD1O14562 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.99■□□□□ 0.31
UBFD1O14562 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.99■□□□□ 0.31
UBFD1O14562 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.99■□□□□ 0.31
UBFD1O14562 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.99■□□□□ 0.31
UBFD1O14562 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
UBFD1O14562 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.99■□□□□ 0.31
UBFD1O14562 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
UBFD1O14562 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.99■□□□□ 0.31
UBFD1O14562 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
UBFD1O14562 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.98■□□□□ 0.31
UBFD1O14562 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 AL845331.1-201ENST00000424978 1190 ntBASIC16.98■□□□□ 0.31
UBFD1O14562 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
UBFD1O14562 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.98■□□□□ 0.31
UBFD1O14562 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.98■□□□□ 0.31
UBFD1O14562 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.98■□□□□ 0.31
UBFD1O14562 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.98■□□□□ 0.31
UBFD1O14562 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
UBFD1O14562 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
UBFD1O14562 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
UBFD1O14562 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
UBFD1O14562 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBFD1O14562 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.97■□□□□ 0.31
UBFD1O14562 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.97■□□□□ 0.31
UBFD1O14562 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.97■□□□□ 0.31
UBFD1O14562 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.97■□□□□ 0.31
UBFD1O14562 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.97■□□□□ 0.31
UBFD1O14562 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.97■□□□□ 0.31
UBFD1O14562 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.97■□□□□ 0.31
UBFD1O14562 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.97■□□□□ 0.31
UBFD1O14562 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 AC211429.1-201ENST00000415277 523 ntBASIC16.97■□□□□ 0.31
UBFD1O14562 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.97■□□□□ 0.31
UBFD1O14562 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.97■□□□□ 0.31
UBFD1O14562 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.97■□□□□ 0.31
UBFD1O14562 RN7SL606P-201ENST00000472779 293 ntBASIC16.97■□□□□ 0.31
UBFD1O14562 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.97■□□□□ 0.31
UBFD1O14562 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 AC109462.3-201ENST00000573934 613 ntBASIC16.97■□□□□ 0.31
UBFD1O14562 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.97■□□□□ 0.31
UBFD1O14562 PCDHB19P-201ENST00000570871 2371 ntBASIC16.97■□□□□ 0.31
UBFD1O14562 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.97■□□□□ 0.31
UBFD1O14562 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
UBFD1O14562 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UBFD1O14562 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
UBFD1O14562 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.97■□□□□ 0.31
UBFD1O14562 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 RNF216P1-203ENST00000404404 2427 ntBASIC16.97■□□□□ 0.31
UBFD1O14562 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
UBFD1O14562 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UBFD1O14562 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBFD1O14562 AC125634.1-201ENST00000438758 1403 ntBASIC16.96■□□□□ 0.31
UBFD1O14562 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBFD1O14562 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UBFD1O14562 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBFD1O14562 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.96■□□□□ 0.31
UBFD1O14562 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
UBFD1O14562 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.96■□□□□ 0.31
UBFD1O14562 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBFD1O14562 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBFD1O14562 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBFD1O14562 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms