Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 RPL13AP23-201ENST00000480739 586 ntBASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 NKAPP1-205ENST00000585790 367 ntBASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPA3F8WFD2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 OR7E14P-202ENST00000530490 1290 ntBASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 AL139288.1-201ENST00000623748 933 ntBASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 KRT8P47-201ENST00000604727 1398 ntBASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA3F8WFD2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NPIPA3F8WFD2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPIPA3F8WFD2 AC010460.3-201ENST00000511359 1579 ntBASIC15.96■□□□□ 0.14
NPIPA3F8WFD2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 AC100803.2-201ENST00000562459 1963 ntBASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 MIR940-201ENST00000401276 94 ntBASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA3F8WFD2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms