Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 RPL13AP23-201ENST00000480739 586 ntBASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 NKAPP1-205ENST00000585790 367 ntBASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.97■□□□□ 0.15
NPIPA2E9PIF3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 OR7E14P-202ENST00000530490 1290 ntBASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 AL139288.1-201ENST00000623748 933 ntBASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 KRT8P47-201ENST00000604727 1398 ntBASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
NPIPA2E9PIF3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NPIPA2E9PIF3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NPIPA2E9PIF3 AC010460.3-201ENST00000511359 1579 ntBASIC15.96■□□□□ 0.14
NPIPA2E9PIF3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
NPIPA2E9PIF3 AC100803.2-201ENST00000562459 1963 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms