Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC25.68■■□□□ 1.7
HFM1A2PYH4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC25.68■■□□□ 1.7
HFM1A2PYH4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
HFM1A2PYH4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HFM1A2PYH4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC25.68■■□□□ 1.7
HFM1A2PYH4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC25.68■■□□□ 1.7
HFM1A2PYH4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC25.68■■□□□ 1.7
HFM1A2PYH4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
HFM1A2PYH4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
HFM1A2PYH4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HFM1A2PYH4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
HFM1A2PYH4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HFM1A2PYH4 PMS2P7-201ENST00000506558 1336 ntBASIC25.67■■□□□ 1.7
HFM1A2PYH4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
HFM1A2PYH4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
HFM1A2PYH4 COX10-202ENST00000429152 875 ntTSL 2 BASIC25.67■■□□□ 1.7
HFM1A2PYH4 RNA5SP416-201ENST00000516838 111 ntBASIC25.67■■□□□ 1.7
HFM1A2PYH4 AC092865.5-201ENST00000545435 363 ntBASIC25.67■■□□□ 1.7
HFM1A2PYH4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC25.67■■□□□ 1.7
HFM1A2PYH4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC25.67■■□□□ 1.7
HFM1A2PYH4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC25.67■■□□□ 1.7
HFM1A2PYH4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
HFM1A2PYH4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC25.67■■□□□ 1.7
HFM1A2PYH4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HFM1A2PYH4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
HFM1A2PYH4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
HFM1A2PYH4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
HFM1A2PYH4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC25.66■■□□□ 1.7
HFM1A2PYH4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
HFM1A2PYH4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
HFM1A2PYH4 CYP51A1P2-201ENST00000419457 1499 ntBASIC25.66■■□□□ 1.7
HFM1A2PYH4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HFM1A2PYH4 AC002310.6-201ENST00000624451 1377 ntBASIC25.66■■□□□ 1.7
HFM1A2PYH4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
HFM1A2PYH4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC25.66■■□□□ 1.7
HFM1A2PYH4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
HFM1A2PYH4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC25.66■■□□□ 1.7
HFM1A2PYH4 BX842568.4-201ENST00000421222 227 ntBASIC25.66■■□□□ 1.7
HFM1A2PYH4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
HFM1A2PYH4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC25.66■■□□□ 1.7
HFM1A2PYH4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
HFM1A2PYH4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
HFM1A2PYH4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC25.66■■□□□ 1.7
HFM1A2PYH4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
HFM1A2PYH4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC25.66■■□□□ 1.7
HFM1A2PYH4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
HFM1A2PYH4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
HFM1A2PYH4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
HFM1A2PYH4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
HFM1A2PYH4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
HFM1A2PYH4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HFM1A2PYH4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC25.65■■□□□ 1.7
HFM1A2PYH4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC25.65■■□□□ 1.7
HFM1A2PYH4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC25.65■■□□□ 1.7
HFM1A2PYH4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC25.65■■□□□ 1.7
HFM1A2PYH4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC25.65■■□□□ 1.7
HFM1A2PYH4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC25.65■■□□□ 1.7
HFM1A2PYH4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
HFM1A2PYH4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC25.65■■□□□ 1.7
HFM1A2PYH4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
HFM1A2PYH4 PI4KAP1-204ENST00000612579 1703 ntBASIC25.65■■□□□ 1.7
HFM1A2PYH4 AC093525.9-201ENST00000624961 1746 ntBASIC25.65■■□□□ 1.7
HFM1A2PYH4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
HFM1A2PYH4 CROCCP2-202ENST00000412962 2773 ntBASIC25.64■■□□□ 1.7
HFM1A2PYH4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
HFM1A2PYH4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
HFM1A2PYH4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
HFM1A2PYH4 ATP6V0CP3-201ENST00000417255 467 ntBASIC25.64■■□□□ 1.7
HFM1A2PYH4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC25.64■■□□□ 1.7
HFM1A2PYH4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC25.64■■□□□ 1.7
HFM1A2PYH4 AC092183.1-201ENST00000469884 875 ntBASIC25.64■■□□□ 1.7
HFM1A2PYH4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
HFM1A2PYH4 AC040169.1-201ENST00000565382 521 ntBASIC25.64■■□□□ 1.7
HFM1A2PYH4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
HFM1A2PYH4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
HFM1A2PYH4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC25.64■■□□□ 1.69
HFM1A2PYH4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.69
HFM1A2PYH4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
HFM1A2PYH4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC25.64■■□□□ 1.69
HFM1A2PYH4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
HFM1A2PYH4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 ACTL9-202ENST00000612068 1252 ntBASIC25.63■■□□□ 1.69
HFM1A2PYH4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HFM1A2PYH4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
HFM1A2PYH4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HFM1A2PYH4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HFM1A2PYH4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HFM1A2PYH4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC25.63■■□□□ 1.69
HFM1A2PYH4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
HFM1A2PYH4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms