Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 ABHD17AP4-201ENST00000411545 909 ntBASIC21.5■■□□□ 1.03
PPP1R3EQ9H7J1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.5■■□□□ 1.03
PPP1R3EQ9H7J1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PPP1R3EQ9H7J1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L11-201ENST00000611504 1267 ntBASIC21.49■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L12-201ENST00000614593 1267 ntBASIC21.49■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L14-201ENST00000621227 1267 ntBASIC21.49■■□□□ 1.03
PPP1R3EQ9H7J1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
PPP1R3EQ9H7J1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PPP1R3EQ9H7J1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.48■■□□□ 1.03
PPP1R3EQ9H7J1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP1R3EQ9H7J1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP1R3EQ9H7J1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PPP1R3EQ9H7J1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L13-201ENST00000554103 1267 ntBASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L15-201ENST00000611059 1267 ntBASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L23-201ENST00000615195 1269 ntBASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L24-201ENST00000617576 1269 ntBASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L22-201ENST00000618238 1269 ntBASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L20-201ENST00000619712 1269 ntBASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L21-201ENST00000622058 1269 ntBASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L10-201ENST00000622460 1267 ntBASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 DUX4L25-201ENST00000624915 1269 ntBASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP1R3EQ9H7J1 AC133561.1-201ENST00000568600 2415 ntBASIC21.46■■□□□ 1.03
PPP1R3EQ9H7J1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PPP1R3EQ9H7J1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PPP1R3EQ9H7J1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP1R3EQ9H7J1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP1R3EQ9H7J1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.46■■□□□ 1.03
PPP1R3EQ9H7J1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP1R3EQ9H7J1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PPP1R3EQ9H7J1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.45■■□□□ 1.02
PPP1R3EQ9H7J1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.45■■□□□ 1.02
PPP1R3EQ9H7J1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PPP1R3EQ9H7J1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP1R3EQ9H7J1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.45■■□□□ 1.02
PPP1R3EQ9H7J1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.45■■□□□ 1.02
PPP1R3EQ9H7J1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
PPP1R3EQ9H7J1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP1R3EQ9H7J1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PPP1R3EQ9H7J1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP1R3EQ9H7J1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.43■■□□□ 1.02
PPP1R3EQ9H7J1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP1R3EQ9H7J1 AP004609.3-201ENST00000610705 1884 ntBASIC21.43■■□□□ 1.02
PPP1R3EQ9H7J1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP1R3EQ9H7J1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPP1R3EQ9H7J1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PPP1R3EQ9H7J1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PPP1R3EQ9H7J1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PPP1R3EQ9H7J1 AC142381.3-201ENST00000568208 1670 ntBASIC21.42■■□□□ 1.02
PPP1R3EQ9H7J1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.41■■□□□ 1.02
PPP1R3EQ9H7J1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP1R3EQ9H7J1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP1R3EQ9H7J1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PPP1R3EQ9H7J1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PPP1R3EQ9H7J1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PPP1R3EQ9H7J1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.41■■□□□ 1.02
PPP1R3EQ9H7J1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.4■■□□□ 1.02
PPP1R3EQ9H7J1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.4■■□□□ 1.02
PPP1R3EQ9H7J1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PPP1R3EQ9H7J1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.4■■□□□ 1.02
PPP1R3EQ9H7J1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.4■■□□□ 1.02
PPP1R3EQ9H7J1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PPP1R3EQ9H7J1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PPP1R3EQ9H7J1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PPP1R3EQ9H7J1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PPP1R3EQ9H7J1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PPP1R3EQ9H7J1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.39■■□□□ 1.01
PPP1R3EQ9H7J1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PPP1R3EQ9H7J1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPP1R3EQ9H7J1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PPP1R3EQ9H7J1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 AL139125.2-201ENST00000623134 1869 ntBASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.38■■□□□ 1.01
PPP1R3EQ9H7J1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP1R3EQ9H7J1 AC012676.1-201ENST00000574705 1949 ntBASIC21.37■■□□□ 1.01
PPP1R3EQ9H7J1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP1R3EQ9H7J1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP1R3EQ9H7J1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP1R3EQ9H7J1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PPP1R3EQ9H7J1 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.37■■□□□ 1.01
PPP1R3EQ9H7J1 CR559946.2-201ENST00000623684 991 ntBASIC21.37■■□□□ 1.01
PPP1R3EQ9H7J1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PPP1R3EQ9H7J1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms