Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CDC42EP4Q9H3Q1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42EP4Q9H3Q1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42EP4Q9H3Q1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.75■■□□□ 1.55
CDC42EP4Q9H3Q1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42EP4Q9H3Q1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
CDC42EP4Q9H3Q1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42EP4Q9H3Q1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42EP4Q9H3Q1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42EP4Q9H3Q1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42EP4Q9H3Q1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42EP4Q9H3Q1 AL139125.2-201ENST00000623134 1869 ntBASIC24.74■■□□□ 1.55
CDC42EP4Q9H3Q1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42EP4Q9H3Q1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42EP4Q9H3Q1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
CDC42EP4Q9H3Q1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CDC42EP4Q9H3Q1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.73■■□□□ 1.55
CDC42EP4Q9H3Q1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42EP4Q9H3Q1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42EP4Q9H3Q1 AC096887.2-201ENST00000623443 1957 ntBASIC24.73■■□□□ 1.55
CDC42EP4Q9H3Q1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.72■■□□□ 1.55
CDC42EP4Q9H3Q1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42EP4Q9H3Q1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
CDC42EP4Q9H3Q1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.72■■□□□ 1.55
CDC42EP4Q9H3Q1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42EP4Q9H3Q1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
CDC42EP4Q9H3Q1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CDC42EP4Q9H3Q1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.72■■□□□ 1.55
CDC42EP4Q9H3Q1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
CDC42EP4Q9H3Q1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.71■■□□□ 1.55
CDC42EP4Q9H3Q1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42EP4Q9H3Q1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42EP4Q9H3Q1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42EP4Q9H3Q1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42EP4Q9H3Q1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42EP4Q9H3Q1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.71■■□□□ 1.55
CDC42EP4Q9H3Q1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
CDC42EP4Q9H3Q1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CDC42EP4Q9H3Q1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
CDC42EP4Q9H3Q1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.7■■□□□ 1.54
CDC42EP4Q9H3Q1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.54
CDC42EP4Q9H3Q1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.69■■□□□ 1.54
CDC42EP4Q9H3Q1 AC021231.2-201ENST00000594613 730 ntBASIC24.69■■□□□ 1.54
CDC42EP4Q9H3Q1 AC044849.2-201ENST00000606596 710 ntBASIC24.69■■□□□ 1.54
CDC42EP4Q9H3Q1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42EP4Q9H3Q1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDC42EP4Q9H3Q1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.68■■□□□ 1.54
CDC42EP4Q9H3Q1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDC42EP4Q9H3Q1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.68■■□□□ 1.54
CDC42EP4Q9H3Q1 AL162393.1-201ENST00000437852 946 ntBASIC24.68■■□□□ 1.54
CDC42EP4Q9H3Q1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.68■■□□□ 1.54
CDC42EP4Q9H3Q1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.68■■□□□ 1.54
CDC42EP4Q9H3Q1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42EP4Q9H3Q1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42EP4Q9H3Q1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.67■■□□□ 1.54
CDC42EP4Q9H3Q1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42EP4Q9H3Q1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.67■■□□□ 1.54
CDC42EP4Q9H3Q1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.67■■□□□ 1.54
CDC42EP4Q9H3Q1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDC42EP4Q9H3Q1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
CDC42EP4Q9H3Q1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42EP4Q9H3Q1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42EP4Q9H3Q1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42EP4Q9H3Q1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.66■■□□□ 1.54
CDC42EP4Q9H3Q1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CDC42EP4Q9H3Q1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42EP4Q9H3Q1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42EP4Q9H3Q1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDC42EP4Q9H3Q1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.65■■□□□ 1.54
CDC42EP4Q9H3Q1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
CDC42EP4Q9H3Q1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDC42EP4Q9H3Q1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CDC42EP4Q9H3Q1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.63■■□□□ 1.53
CDC42EP4Q9H3Q1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42EP4Q9H3Q1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42EP4Q9H3Q1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.63■■□□□ 1.53
CDC42EP4Q9H3Q1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CDC42EP4Q9H3Q1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42EP4Q9H3Q1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42EP4Q9H3Q1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.63■■□□□ 1.53
CDC42EP4Q9H3Q1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDC42EP4Q9H3Q1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42EP4Q9H3Q1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.62■■□□□ 1.53
CDC42EP4Q9H3Q1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
CDC42EP4Q9H3Q1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.62■■□□□ 1.53
CDC42EP4Q9H3Q1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
CDC42EP4Q9H3Q1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42EP4Q9H3Q1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.62■■□□□ 1.53
CDC42EP4Q9H3Q1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42EP4Q9H3Q1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.61■■□□□ 1.53
CDC42EP4Q9H3Q1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
CDC42EP4Q9H3Q1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.61■■□□□ 1.53
CDC42EP4Q9H3Q1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42EP4Q9H3Q1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.6■■□□□ 1.53
CDC42EP4Q9H3Q1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42EP4Q9H3Q1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42EP4Q9H3Q1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.6■■□□□ 1.53
CDC42EP4Q9H3Q1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42EP4Q9H3Q1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42EP4Q9H3Q1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms