Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
VPS16Q9H269 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
VPS16Q9H269 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
VPS16Q9H269 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
VPS16Q9H269 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
VPS16Q9H269 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS16Q9H269 HLA-V-202ENST00000446817 847 ntBASIC26.71■■□□□ 1.87
VPS16Q9H269 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS16Q9H269 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS16Q9H269 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS16Q9H269 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS16Q9H269 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
VPS16Q9H269 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
VPS16Q9H269 AC148477.6-201ENST00000623746 465 ntBASIC26.7■■□□□ 1.86
VPS16Q9H269 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
VPS16Q9H269 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VPS16Q9H269 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.69■■□□□ 1.86
VPS16Q9H269 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.69■■□□□ 1.86
VPS16Q9H269 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VPS16Q9H269 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VPS16Q9H269 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
VPS16Q9H269 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS16Q9H269 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.68■■□□□ 1.86
VPS16Q9H269 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS16Q9H269 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
VPS16Q9H269 ZNRF2P2-203ENST00000454624 420 ntBASIC26.68■■□□□ 1.86
VPS16Q9H269 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
VPS16Q9H269 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
VPS16Q9H269 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
VPS16Q9H269 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS16Q9H269 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.66■■□□□ 1.86
VPS16Q9H269 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS16Q9H269 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS16Q9H269 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
VPS16Q9H269 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
VPS16Q9H269 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
VPS16Q9H269 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
VPS16Q9H269 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
VPS16Q9H269 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.64■■□□□ 1.86
VPS16Q9H269 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
VPS16Q9H269 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS16Q9H269 AL359258.2-201ENST00000564063 1566 ntBASIC26.63■■□□□ 1.85
VPS16Q9H269 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
VPS16Q9H269 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.63■■□□□ 1.85
VPS16Q9H269 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
VPS16Q9H269 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
VPS16Q9H269 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS16Q9H269 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
VPS16Q9H269 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.62■■□□□ 1.85
VPS16Q9H269 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
VPS16Q9H269 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
VPS16Q9H269 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
VPS16Q9H269 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
VPS16Q9H269 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
VPS16Q9H269 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.62■■□□□ 1.85
VPS16Q9H269 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
VPS16Q9H269 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
VPS16Q9H269 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS16Q9H269 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.61■■□□□ 1.85
VPS16Q9H269 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.61■■□□□ 1.85
VPS16Q9H269 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
VPS16Q9H269 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
VPS16Q9H269 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.6■■□□□ 1.85
VPS16Q9H269 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
VPS16Q9H269 AL359504.2-201ENST00000605506 1601 ntBASIC26.6■■□□□ 1.85
VPS16Q9H269 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS16Q9H269 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS16Q9H269 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS16Q9H269 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.59■■□□□ 1.85
VPS16Q9H269 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS16Q9H269 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.59■■□□□ 1.85
VPS16Q9H269 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.59■■□□□ 1.85
VPS16Q9H269 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.58■■□□□ 1.85
VPS16Q9H269 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
VPS16Q9H269 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS16Q9H269 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS16Q9H269 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS16Q9H269 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS16Q9H269 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
VPS16Q9H269 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
VPS16Q9H269 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
VPS16Q9H269 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS16Q9H269 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.57■■□□□ 1.84
VPS16Q9H269 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
VPS16Q9H269 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
VPS16Q9H269 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS16Q9H269 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
VPS16Q9H269 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.56■■□□□ 1.84
VPS16Q9H269 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
VPS16Q9H269 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
VPS16Q9H269 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
VPS16Q9H269 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS16Q9H269 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS16Q9H269 AC096887.2-201ENST00000623443 1957 ntBASIC26.56■■□□□ 1.84
VPS16Q9H269 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS16Q9H269 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.55■■□□□ 1.84
VPS16Q9H269 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.55■■□□□ 1.84
VPS16Q9H269 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VPS16Q9H269 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.55■■□□□ 1.84
VPS16Q9H269 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms