Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CALR3Q96L12 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CALR3Q96L12 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CALR3Q96L12 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.69■■□□□ 1.7
CALR3Q96L12 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.69■■□□□ 1.7
CALR3Q96L12 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CALR3Q96L12 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.68■■□□□ 1.7
CALR3Q96L12 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.68■■□□□ 1.7
CALR3Q96L12 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CALR3Q96L12 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
CALR3Q96L12 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CALR3Q96L12 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CALR3Q96L12 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CALR3Q96L12 ERN1-208ENST00000606895 2068 ntBASIC25.67■■□□□ 1.7
CALR3Q96L12 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CALR3Q96L12 DUX4L11-201ENST00000611504 1267 ntBASIC25.67■■□□□ 1.7
CALR3Q96L12 DUX4L12-201ENST00000614593 1267 ntBASIC25.67■■□□□ 1.7
CALR3Q96L12 DUX4L14-201ENST00000621227 1267 ntBASIC25.67■■□□□ 1.7
CALR3Q96L12 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CALR3Q96L12 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CALR3Q96L12 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CALR3Q96L12 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.66■■□□□ 1.7
CALR3Q96L12 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.65■■□□□ 1.7
CALR3Q96L12 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CALR3Q96L12 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CALR3Q96L12 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CALR3Q96L12 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.64■■□□□ 1.7
CALR3Q96L12 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CALR3Q96L12 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
CALR3Q96L12 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.64■■□□□ 1.69
CALR3Q96L12 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CALR3Q96L12 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.64■■□□□ 1.69
CALR3Q96L12 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.63■■□□□ 1.69
CALR3Q96L12 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.63■■□□□ 1.69
CALR3Q96L12 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
CALR3Q96L12 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CALR3Q96L12 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.63■■□□□ 1.69
CALR3Q96L12 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.63■■□□□ 1.69
CALR3Q96L12 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CALR3Q96L12 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
CALR3Q96L12 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CALR3Q96L12 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.62■■□□□ 1.69
CALR3Q96L12 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.62■■□□□ 1.69
CALR3Q96L12 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CALR3Q96L12 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CALR3Q96L12 AC142381.3-201ENST00000568208 1670 ntBASIC25.61■■□□□ 1.69
CALR3Q96L12 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.61■■□□□ 1.69
CALR3Q96L12 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CALR3Q96L12 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CALR3Q96L12 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CALR3Q96L12 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CALR3Q96L12 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CALR3Q96L12 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.6■■□□□ 1.69
CALR3Q96L12 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.6■■□□□ 1.69
CALR3Q96L12 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CALR3Q96L12 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CALR3Q96L12 AL359258.2-201ENST00000564063 1566 ntBASIC25.6■■□□□ 1.69
CALR3Q96L12 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CALR3Q96L12 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CALR3Q96L12 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CALR3Q96L12 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.59■■□□□ 1.69
CALR3Q96L12 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
CALR3Q96L12 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CALR3Q96L12 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.58■■□□□ 1.69
CALR3Q96L12 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CALR3Q96L12 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.58■■□□□ 1.69
CALR3Q96L12 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CALR3Q96L12 RPS2P35-201ENST00000443417 897 ntBASIC25.58■■□□□ 1.69
CALR3Q96L12 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CALR3Q96L12 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.57■■□□□ 1.68
CALR3Q96L12 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CALR3Q96L12 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.57■■□□□ 1.68
CALR3Q96L12 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CALR3Q96L12 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CALR3Q96L12 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CALR3Q96L12 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.56■■□□□ 1.68
CALR3Q96L12 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CALR3Q96L12 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CALR3Q96L12 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.56■■□□□ 1.68
CALR3Q96L12 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
CALR3Q96L12 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CALR3Q96L12 AL359504.2-201ENST00000605506 1601 ntBASIC25.55■■□□□ 1.68
CALR3Q96L12 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CALR3Q96L12 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.55■■□□□ 1.68
CALR3Q96L12 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CALR3Q96L12 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CALR3Q96L12 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms