Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 GEX1YCL073C 1848 nt4.68□□□□□ -1.66
SMD1Q02260 SUF5tG(CCC)O 72 nt4.68□□□□□ -1.66
SMD1Q02260 TIF2YJL138C 1188 nt4.68□□□□□ -1.66
SMD1Q02260 REC107YJR021C 945 nt4.68□□□□□ -1.66
SMD1Q02260 TIF1YKR059W 1188 nt4.68□□□□□ -1.66
SMD1Q02260 YNR005CYNR005C 405 nt4.68□□□□□ -1.66
SMD1Q02260 HST2YPL015C 1074 nt4.68□□□□□ -1.66
SMD1Q02260 ERG10YPL028W 1197 nt4.68□□□□□ -1.66
SMD1Q02260 YBR113WYBR113W 483 nt4.68□□□□□ -1.66
SMD1Q02260 NPL6YMR091C 1308 nt4.68□□□□□ -1.66
SMD1Q02260 NAF1YNL124W 1479 nt4.68□□□□□ -1.66
SMD1Q02260 STE13YOR219C 2796 nt4.67□□□□□ -1.66
SMD1Q02260 SET5YHR207C 1581 nt4.67□□□□□ -1.66
SMD1Q02260 TMA46YOR091W 1038 nt4.67□□□□□ -1.66
SMD1Q02260 YPR130CYPR130C 408 nt4.67□□□□□ -1.66
SMD1Q02260 ACC1YNR016C 6702 nt4.67□□□□□ -1.66
SMD1Q02260 GEX2YKR106W 1848 nt4.67□□□□□ -1.66
SMD1Q02260 GUP2YPL189W 1830 nt4.67□□□□□ -1.66
SMD1Q02260 PEX31YGR004W 1389 nt4.66□□□□□ -1.66
SMD1Q02260 DUR1,2YBR208C 5508 nt4.66□□□□□ -1.66
SMD1Q02260 MIA40YKL195W 1212 nt4.66□□□□□ -1.66
SMD1Q02260 GEP5YLR091W 882 nt4.66□□□□□ -1.66
SMD1Q02260 IRC11YOR013W 471 nt4.66□□□□□ -1.66
SMD1Q02260 ENP1YBR247C 1452 nt4.66□□□□□ -1.66
SMD1Q02260 YHR020WYHR020W 2067 nt4.66□□□□□ -1.66
SMD1Q02260 RSA4YCR072C 1548 nt4.66□□□□□ -1.66
SMD1Q02260 AFG1YEL052W 1530 nt4.66□□□□□ -1.66
SMD1Q02260 CHL4YDR254W 1377 nt4.65□□□□□ -1.66
SMD1Q02260 SWD1YAR003W 1281 nt4.65□□□□□ -1.67
SMD1Q02260 DFR1YOR236W 636 nt4.65□□□□□ -1.67
SMD1Q02260 TFC6YDR362C 2019 nt4.65□□□□□ -1.67
SMD1Q02260 PMT3YOR321W 2262 nt4.65□□□□□ -1.67
SMD1Q02260 XBP1YIL101C 1944 nt4.64□□□□□ -1.67
SMD1Q02260 YDR415CYDR415C 1125 nt4.64□□□□□ -1.67
SMD1Q02260 PRS4YBL068W 981 nt4.64□□□□□ -1.67
SMD1Q02260 TOS6YNL300W 309 nt4.64□□□□□ -1.67
SMD1Q02260 YPQ1YOL092W 927 nt4.64□□□□□ -1.67
SMD1Q02260 YCL049CYCL049C 939 nt4.64□□□□□ -1.67
SMD1Q02260 RSC2YLR357W 2670 nt4.63□□□□□ -1.67
SMD1Q02260 EDC2YER035W 438 nt4.63□□□□□ -1.67
SMD1Q02260 PRI1YIR008C 1230 nt4.63□□□□□ -1.67
SMD1Q02260 RPL31BYLR406C 342 nt4.63□□□□□ -1.67
SMD1Q02260 CSC1YLR241W 2349 nt4.63□□□□□ -1.67
SMD1Q02260 CIA1YDR267C 993 nt4.62□□□□□ -1.67
SMD1Q02260 YGL102CYGL102C 429 nt4.62□□□□□ -1.67
SMD1Q02260 CBR1YIL043C 855 nt4.62□□□□□ -1.67
SMD1Q02260 YJR107WYJR107W 987 nt4.62□□□□□ -1.67
SMD1Q02260 COX5AYNL052W 462 nt4.62□□□□□ -1.67
SMD1Q02260 ERG7YHR072W 2196 nt4.62□□□□□ -1.67
SMD1Q02260 PPM2YOL141W 2088 nt4.61□□□□□ -1.67
SMD1Q02260 ALT1YLR089C 1779 nt4.61□□□□□ -1.67
SMD1Q02260 OPT1YJL212C 2400 nt4.61□□□□□ -1.67
SMD1Q02260 COX20YDR231C 618 nt4.61□□□□□ -1.67
SMD1Q02260 YDR401WYDR401W 564 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)BtG(GCC)B 71 nt4.61□□□□□ -1.67
SMD1Q02260 SUF16tG(GCC)C 71 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)D1tG(GCC)D1 71 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)D2tG(GCC)D2 71 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)EtG(GCC)E 71 nt4.61□□□□□ -1.67
SMD1Q02260 SUF20tG(GCC)F1 71 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)F2tG(GCC)F2 71 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)G1tG(GCC)G1 71 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)G2tG(GCC)G2 71 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)J1tG(GCC)J1 71 nt4.61□□□□□ -1.67
SMD1Q02260 SUF23tG(GCC)J2 71 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)MtG(GCC)M 71 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)O1tG(GCC)O1 71 nt4.61□□□□□ -1.67
SMD1Q02260 SUF17tG(GCC)O2 71 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)P1tG(GCC)P1 71 nt4.61□□□□□ -1.67
SMD1Q02260 tG(GCC)P2tG(GCC)P2 71 nt4.61□□□□□ -1.67
SMD1Q02260 YPT1YFL038C 621 nt4.61□□□□□ -1.67
SMD1Q02260 SOH1YGL127C 384 nt4.61□□□□□ -1.67
SMD1Q02260 DYS1YHR068W 1164 nt4.61□□□□□ -1.67
SMD1Q02260 REV7YIL139C 738 nt4.61□□□□□ -1.67
SMD1Q02260 HSP150YJL159W 1242 nt4.61□□□□□ -1.67
SMD1Q02260 YJL171CYJL171C 1191 nt4.61□□□□□ -1.67
SMD1Q02260 SMX3YPR182W 261 nt4.61□□□□□ -1.67
SMD1Q02260 PZF1YPR186C 1290 nt4.61□□□□□ -1.67
SMD1Q02260 ADH5YBR145W 1056 nt4.61□□□□□ -1.67
SMD1Q02260 BZZ1YHR114W 1902 nt4.61□□□□□ -1.67
SMD1Q02260 ISC1YER019W 1434 nt4.61□□□□□ -1.67
SMD1Q02260 PHO3YBR092C 1404 nt4.61□□□□□ -1.67
SMD1Q02260 AAP1YHR047C 2571 nt4.6□□□□□ -1.67
SMD1Q02260 GPB2YAL056W 2643 nt4.6□□□□□ -1.67
SMD1Q02260 TRR2YHR106W 1029 nt4.6□□□□□ -1.67
SMD1Q02260 ATG36YJL185C 882 nt4.6□□□□□ -1.67
SMD1Q02260 YLL056CYLL056C 897 nt4.6□□□□□ -1.67
SMD1Q02260 MRPL19YNL185C 477 nt4.6□□□□□ -1.67
SMD1Q02260 FIT2YOR382W 462 nt4.6□□□□□ -1.67
SMD1Q02260 PEX3YDR329C 1326 nt4.6□□□□□ -1.67
SMD1Q02260 SES1YDR023W 1389 nt4.6□□□□□ -1.67
SMD1Q02260 ATG23YLR431C 1362 nt4.6□□□□□ -1.67
SMD1Q02260 COX10YPL172C 1389 nt4.6□□□□□ -1.67
SMD1Q02260 RMD9YGL107C 1941 nt4.6□□□□□ -1.67
SMD1Q02260 STT3YGL022W 2157 nt4.59□□□□□ -1.67
SMD1Q02260 SPG1YGR236C 288 nt4.59□□□□□ -1.67
SMD1Q02260 RNR3YIL066C 2610 nt4.59□□□□□ -1.67
SMD1Q02260 YKL018C-AYKL018C-A 300 nt4.59□□□□□ -1.67
SMD1Q02260 RFC4YOL094C 972 nt4.59□□□□□ -1.67
SMD1Q02260 CST26YBR042C 1194 nt4.59□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 48.2 ms