Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC25A1P53007 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC25A1P53007 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC25A1P53007 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC25A1P53007 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC25A1P53007 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC25A1P53007 HLA-V-202ENST00000446817 847 ntBASIC21.67■■□□□ 1.06
SLC25A1P53007 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC25A1P53007 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC25A1P53007 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC25A1P53007 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SLC25A1P53007 AL359258.2-201ENST00000564063 1566 ntBASIC21.66■■□□□ 1.06
SLC25A1P53007 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC25A1P53007 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC25A1P53007 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.66■■□□□ 1.06
SLC25A1P53007 ZNRF2P2-203ENST00000454624 420 ntBASIC21.66■■□□□ 1.06
SLC25A1P53007 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC25A1P53007 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC25A1P53007 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC25A1P53007 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.65■■□□□ 1.06
SLC25A1P53007 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SLC25A1P53007 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.65■■□□□ 1.06
SLC25A1P53007 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SLC25A1P53007 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.64■■□□□ 1.06
SLC25A1P53007 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC25A1P53007 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC25A1P53007 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC25A1P53007 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC25A1P53007 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC25A1P53007 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC25A1P53007 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SLC25A1P53007 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC25A1P53007 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC25A1P53007 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.62■■□□□ 1.05
SLC25A1P53007 AL359504.2-201ENST00000605506 1601 ntBASIC21.62■■□□□ 1.05
SLC25A1P53007 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC25A1P53007 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC25A1P53007 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SLC25A1P53007 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC25A1P53007 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SLC25A1P53007 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC25A1P53007 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC25A1P53007 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC25A1P53007 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC25A1P53007 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC25A1P53007 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC25A1P53007 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC25A1P53007 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
SLC25A1P53007 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC25A1P53007 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
SLC25A1P53007 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SLC25A1P53007 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC25A1P53007 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC25A1P53007 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
SLC25A1P53007 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC25A1P53007 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SLC25A1P53007 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC25A1P53007 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC25A1P53007 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC25A1P53007 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC25A1P53007 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC25A1P53007 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC25A1P53007 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.58■■□□□ 1.04
SLC25A1P53007 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC25A1P53007 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC25A1P53007 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC25A1P53007 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC25A1P53007 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC25A1P53007 CR559946.2-201ENST00000623684 991 ntBASIC21.57■■□□□ 1.04
SLC25A1P53007 AC096887.2-201ENST00000623443 1957 ntBASIC21.57■■□□□ 1.04
SLC25A1P53007 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC25A1P53007 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC25A1P53007 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SLC25A1P53007 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.56■■□□□ 1.04
SLC25A1P53007 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SLC25A1P53007 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC25A1P53007 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SLC25A1P53007 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.56■■□□□ 1.04
SLC25A1P53007 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC25A1P53007 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
SLC25A1P53007 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC25A1P53007 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.55■■□□□ 1.04
SLC25A1P53007 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC25A1P53007 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC25A1P53007 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC25A1P53007 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC25A1P53007 AC142381.3-201ENST00000568208 1670 ntBASIC21.55■■□□□ 1.04
SLC25A1P53007 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SLC25A1P53007 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC25A1P53007 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC25A1P53007 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC25A1P53007 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC25A1P53007 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SLC25A1P53007 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.54■■□□□ 1.04
SLC25A1P53007 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC25A1P53007 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.54■■□□□ 1.04
SLC25A1P53007 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC25A1P53007 AC126177.7-201ENST00000547904 679 ntBASIC21.54■■□□□ 1.04
SLC25A1P53007 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC25A1P53007 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms