Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 AVO2YMR068W 1281 nt8.08□□□□□ -1.12
RTR1P40084 PPT1YGR123C 1542 nt8.08□□□□□ -1.12
RTR1P40084 RPP1YHR062C 882 nt8.07□□□□□ -1.12
RTR1P40084 PRY3YJL078C 2646 nt8.07□□□□□ -1.12
RTR1P40084 AIM24YJR080C 1185 nt8.06□□□□□ -1.12
RTR1P40084 SCS7YMR272C 1155 nt8.06□□□□□ -1.12
RTR1P40084 SUF5tG(CCC)O 72 nt8.05□□□□□ -1.12
RTR1P40084 YLR123CYLR123C 330 nt8.05□□□□□ -1.12
RTR1P40084 FSF1YOR271C 984 nt8.05□□□□□ -1.12
RTR1P40084 RVB2YPL235W 1416 nt8.04□□□□□ -1.12
RTR1P40084 YHL018WYHL018W 363 nt8.04□□□□□ -1.12
RTR1P40084 MRPL10YNL284C 969 nt8.04□□□□□ -1.12
RTR1P40084 PEX3YDR329C 1326 nt8.03□□□□□ -1.12
RTR1P40084 UTR2YEL040W 1404 nt8.03□□□□□ -1.12
RTR1P40084 RAD59YDL059C 717 nt8.03□□□□□ -1.12
RTR1P40084 YJR084WYJR084W 1272 nt8.03□□□□□ -1.12
RTR1P40084 YPR204WYPR204W 3099 nt8.02□□□□□ -1.13
RTR1P40084 AMD2YDR242W 1650 nt8.02□□□□□ -1.13
RTR1P40084 MLS1YNL117W 1665 nt8.02□□□□□ -1.13
RTR1P40084 HVG1YER039C 750 nt8.02□□□□□ -1.13
RTR1P40084 HSP12YFL014W 330 nt8.02□□□□□ -1.13
RTR1P40084 PSR2YLR019W 1194 nt8.02□□□□□ -1.13
RTR1P40084 RKI1YOR095C 777 nt8.02□□□□□ -1.13
RTR1P40084 BUG1YDL099W 1026 nt8.01□□□□□ -1.13
RTR1P40084 COX5AYNL052W 462 nt8.01□□□□□ -1.13
RTR1P40084 DSF1YEL070W 1509 nt8.01□□□□□ -1.13
RTR1P40084 YNR073CYNR073C 1509 nt8.01□□□□□ -1.13
RTR1P40084 RNH201YNL072W 924 nt8□□□□□ -1.13
RTR1P40084 SMK1YPR054W 1167 nt8□□□□□ -1.13
RTR1P40084 AFG2YLR397C 2343 nt8□□□□□ -1.13
RTR1P40084 COQ3YOL096C 939 nt7.99□□□□□ -1.13
RTR1P40084 ECM38YLR299W 1983 nt7.99□□□□□ -1.13
RTR1P40084 SES1YDR023W 1389 nt7.98□□□□□ -1.13
RTR1P40084 AAT2YLR027C 1257 nt7.98□□□□□ -1.13
RTR1P40084 RPS3YNL178W 723 nt7.98□□□□□ -1.13
RTR1P40084 ERG1YGR175C 1491 nt7.98□□□□□ -1.13
RTR1P40084 YNL040WYNL040W 1371 nt7.97□□□□□ -1.13
RTR1P40084 BDF2YDL070W 1917 nt7.96□□□□□ -1.13
RTR1P40084 LCB3YJL134W 1230 nt7.96□□□□□ -1.14
RTR1P40084 SUR7YML052W 909 nt7.96□□□□□ -1.14
RTR1P40084 RRN10YBL025W 438 nt7.96□□□□□ -1.14
RTR1P40084 NSG2YNL156C 900 nt7.96□□□□□ -1.14
RTR1P40084 YOR389WYOR389W 1875 nt7.96□□□□□ -1.14
RTR1P40084 CRF1YDR223W 1404 nt7.95□□□□□ -1.14
RTR1P40084 PUS7YOR243C 2031 nt7.95□□□□□ -1.14
RTR1P40084 QCR8YJL166W 285 nt7.95□□□□□ -1.14
RTR1P40084 YNL097W-AYNL097W-A 156 nt7.95□□□□□ -1.14
RTR1P40084 TSR3YOR006C 942 nt7.95□□□□□ -1.14
RTR1P40084 YDR387CYDR387C 1668 nt7.95□□□□□ -1.14
RTR1P40084 ARP3YJR065C 1350 nt7.95□□□□□ -1.14
RTR1P40084 KTR1YOR099W 1182 nt7.94□□□□□ -1.14
RTR1P40084 RIX7YLL034C 2514 nt7.94□□□□□ -1.14
RTR1P40084 ILV1YER086W 1731 nt7.93□□□□□ -1.14
RTR1P40084 IES2YNL215W 963 nt7.92□□□□□ -1.14
RTR1P40084 POX1YGL205W 2247 nt7.92□□□□□ -1.14
RTR1P40084 MCH1YDL054C 1461 nt7.92□□□□□ -1.14
RTR1P40084 HRQ1YDR291W 3234 nt7.91□□□□□ -1.14
RTR1P40084 ECM14YHR132C 1293 nt7.91□□□□□ -1.14
RTR1P40084 YHR213W-AYHR213W-A 234 nt7.91□□□□□ -1.14
RTR1P40084 QRI5YLR204W 336 nt7.91□□□□□ -1.14
RTR1P40084 YIL108WYIL108W 2091 nt7.91□□□□□ -1.14
RTR1P40084 TMT1YER175C 900 nt7.9□□□□□ -1.14
RTR1P40084 YLR157W-EYLR157W-E 165 nt7.9□□□□□ -1.14
RTR1P40084 CIR2YOR356W 1896 nt7.89□□□□□ -1.15
RTR1P40084 ADE17YMR120C 1779 nt7.89□□□□□ -1.15
RTR1P40084 ARG81YML099C 2643 nt7.89□□□□□ -1.15
RTR1P40084 POP5YAL033W 522 nt7.89□□□□□ -1.15
RTR1P40084 MEU1YLR017W 1014 nt7.89□□□□□ -1.15
RTR1P40084 YLL067CYLL067C 3618 nt7.89□□□□□ -1.15
RTR1P40084 MAK31YCR020C-A 267 nt7.88□□□□□ -1.15
RTR1P40084 PRE3YJL001W 648 nt7.88□□□□□ -1.15
RTR1P40084 YMC1YPR058W 924 nt7.88□□□□□ -1.15
RTR1P40084 YET3YDL072C 612 nt7.87□□□□□ -1.15
RTR1P40084 TRR1YDR353W 960 nt7.87□□□□□ -1.15
RTR1P40084 YNL285WYNL285W 372 nt7.87□□□□□ -1.15
RTR1P40084 EXG1YLR300W 1347 nt7.86□□□□□ -1.15
RTR1P40084 NTE1YML059C 5040 nt7.86□□□□□ -1.15
RTR1P40084 YDL218WYDL218W 954 nt7.86□□□□□ -1.15
RTR1P40084 YDR015CYDR015C 240 nt7.86□□□□□ -1.15
RTR1P40084 CTF8YHR191C 402 nt7.86□□□□□ -1.15
RTR1P40084 DOT5YIL010W 648 nt7.86□□□□□ -1.15
RTR1P40084 PGM1YKL127W 1713 nt7.86□□□□□ -1.15
RTR1P40084 CRP1YHR146W 1398 nt7.85□□□□□ -1.15
RTR1P40084 ZRT2YLR130C 1269 nt7.85□□□□□ -1.15
RTR1P40084 TKL2YBR117C 2046 nt7.85□□□□□ -1.15
RTR1P40084 YTP1YNL237W 1380 nt7.84□□□□□ -1.15
RTR1P40084 RPS28AYOR167C 204 nt7.84□□□□□ -1.15
RTR1P40084 DMA1YHR115C 1251 nt7.83□□□□□ -1.16
RTR1P40084 YIR042CYIR042C 711 nt7.83□□□□□ -1.16
RTR1P40084 MOG1YJR074W 657 nt7.83□□□□□ -1.16
RTR1P40084 PEX13YLR191W 1161 nt7.83□□□□□ -1.16
RTR1P40084 YCK1YHR135C 1617 nt7.82□□□□□ -1.16
RTR1P40084 BSC4YNL269W 396 nt7.82□□□□□ -1.16
RTR1P40084 PYC2YBR218C 3543 nt7.82□□□□□ -1.16
RTR1P40084 FRE5YOR384W 2085 nt7.82□□□□□ -1.16
RTR1P40084 TOM71YHR117W 1920 nt7.82□□□□□ -1.16
RTR1P40084 NHA1YLR138W 2958 nt7.81□□□□□ -1.16
RTR1P40084 MED6YHR058C 888 nt7.81□□□□□ -1.16
RTR1P40084 COA1YIL157C 594 nt7.81□□□□□ -1.16
RTR1P40084 JNM1YMR294W 1122 nt7.81□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 25.2 ms