Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 YDL119CYDL119C 924 nt5.44□□□□□ -1.54
TRA1P38811 PRS2YER099C 957 nt5.44□□□□□ -1.54
TRA1P38811 CWC21YDR482C 408 nt5.44□□□□□ -1.54
TRA1P38811 YBR241CYBR241C 1467 nt5.44□□□□□ -1.54
TRA1P38811 ECM14YHR132C 1293 nt5.43□□□□□ -1.54
TRA1P38811 YLR312CYLR312C 1197 nt5.43□□□□□ -1.54
TRA1P38811 PPT1YGR123C 1542 nt5.42□□□□□ -1.54
TRA1P38811 YFL064CYFL064C 525 nt5.42□□□□□ -1.54
TRA1P38811 YKL031WYKL031W 414 nt5.42□□□□□ -1.54
TRA1P38811 IRC11YOR013W 471 nt5.42□□□□□ -1.54
TRA1P38811 YPR202WYPR202W 717 nt5.42□□□□□ -1.54
TRA1P38811 YHR020WYHR020W 2067 nt5.41□□□□□ -1.54
TRA1P38811 HSM3YBR272C 1443 nt5.41□□□□□ -1.54
TRA1P38811 TUF1YOR187W 1314 nt5.41□□□□□ -1.54
TRA1P38811 ATG33YLR356W 594 nt5.41□□□□□ -1.54
TRA1P38811 RFS1YBR052C 633 nt5.41□□□□□ -1.54
TRA1P38811 HSV2YGR223C 1347 nt5.4□□□□□ -1.54
TRA1P38811 PYC2YBR218C 3543 nt5.4□□□□□ -1.54
TRA1P38811 MDM31YHR194W 1740 nt5.4□□□□□ -1.54
TRA1P38811 HXT9YJL219W 1704 nt5.4□□□□□ -1.54
TRA1P38811 TEA1YOR337W 2280 nt5.4□□□□□ -1.54
TRA1P38811 YEL053W-AYEL053W-A 348 nt5.4□□□□□ -1.54
TRA1P38811 TMT1YER175C 900 nt5.4□□□□□ -1.54
TRA1P38811 MSO1YNR049C 633 nt5.4□□□□□ -1.55
TRA1P38811 DAP1YPL170W 459 nt5.4□□□□□ -1.55
TRA1P38811 YPR127WYPR127W 1038 nt5.4□□□□□ -1.55
TRA1P38811 LCB3YJL134W 1230 nt5.39□□□□□ -1.55
TRA1P38811 RTC2YBR147W 891 nt5.39□□□□□ -1.55
TRA1P38811 MSG5YNL053W 1470 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)BtG(GCC)B 71 nt5.39□□□□□ -1.55
TRA1P38811 SUF16tG(GCC)C 71 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)D1tG(GCC)D1 71 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)D2tG(GCC)D2 71 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)EtG(GCC)E 71 nt5.39□□□□□ -1.55
TRA1P38811 SUF20tG(GCC)F1 71 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)F2tG(GCC)F2 71 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)G1tG(GCC)G1 71 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)G2tG(GCC)G2 71 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)J1tG(GCC)J1 71 nt5.39□□□□□ -1.55
TRA1P38811 SUF23tG(GCC)J2 71 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)MtG(GCC)M 71 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)O1tG(GCC)O1 71 nt5.39□□□□□ -1.55
TRA1P38811 SUF17tG(GCC)O2 71 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)P1tG(GCC)P1 71 nt5.39□□□□□ -1.55
TRA1P38811 tG(GCC)P2tG(GCC)P2 71 nt5.39□□□□□ -1.55
TRA1P38811 SNO4YMR322C 714 nt5.38□□□□□ -1.55
TRA1P38811 HSP33YOR391C 714 nt5.38□□□□□ -1.55
TRA1P38811 HSP32YPL280W 714 nt5.38□□□□□ -1.55
TRA1P38811 SWI1YPL016W 3945 nt5.38□□□□□ -1.55
TRA1P38811 ENB1YOL158C 1821 nt5.38□□□□□ -1.55
TRA1P38811 PHB1YGR132C 864 nt5.38□□□□□ -1.55
TRA1P38811 CIS3YJL158C 684 nt5.38□□□□□ -1.55
TRA1P38811 YJR084WYJR084W 1272 nt5.37□□□□□ -1.55
TRA1P38811 PUF3YLL013C 2640 nt5.37□□□□□ -1.55
TRA1P38811 DYS1YHR068W 1164 nt5.37□□□□□ -1.55
TRA1P38811 CAF40YNL288W 1122 nt5.37□□□□□ -1.55
TRA1P38811 COT1YOR316C 1320 nt5.37□□□□□ -1.55
TRA1P38811 ERS1YCR075C 783 nt5.36□□□□□ -1.55
TRA1P38811 CTF19YPL018W 1110 nt5.36□□□□□ -1.55
TRA1P38811 ATG12YBR217W 561 nt5.36□□□□□ -1.55
TRA1P38811 CCT3YJL014W 1605 nt5.36□□□□□ -1.55
TRA1P38811 YTP1YNL237W 1380 nt5.36□□□□□ -1.55
TRA1P38811 YMR010WYMR010W 1218 nt5.36□□□□□ -1.55
TRA1P38811 SNF4YGL115W 969 nt5.36□□□□□ -1.55
TRA1P38811 YCL041CYCL041C 495 nt5.35□□□□□ -1.55
TRA1P38811 PEX31YGR004W 1389 nt5.35□□□□□ -1.55
TRA1P38811 PAC2YER007W 1557 nt5.35□□□□□ -1.55
TRA1P38811 MDH3YDL078C 1032 nt5.35□□□□□ -1.55
TRA1P38811 PRB1YEL060C 1908 nt5.34□□□□□ -1.55
TRA1P38811 YLR194CYLR194C 765 nt5.34□□□□□ -1.55
TRA1P38811 TKL2YBR117C 2046 nt5.34□□□□□ -1.55
TRA1P38811 YMR034CYMR034C 1305 nt5.34□□□□□ -1.55
TRA1P38811 MRM2YGL136C 963 nt5.34□□□□□ -1.55
TRA1P38811 PYK2YOR347C 1521 nt5.34□□□□□ -1.56
TRA1P38811 CCP1YKR066C 1086 nt5.34□□□□□ -1.56
TRA1P38811 YJR015WYJR015W 1533 nt5.33□□□□□ -1.56
TRA1P38811 MRPS16YPL013C 366 nt5.33□□□□□ -1.56
TRA1P38811 MRPS5YBR251W 924 nt5.33□□□□□ -1.56
TRA1P38811 GAT3YLR013W 426 nt5.33□□□□□ -1.56
TRA1P38811 RFC4YOL094C 972 nt5.33□□□□□ -1.56
TRA1P38811 AAD15YOL165C 432 nt5.33□□□□□ -1.56
TRA1P38811 ALD5YER073W 1563 nt5.33□□□□□ -1.56
TRA1P38811 RGD2YFL047W 2145 nt5.32□□□□□ -1.56
TRA1P38811 MRPL28YDR462W 444 nt5.32□□□□□ -1.56
TRA1P38811 TOK1YJL093C 2076 nt5.32□□□□□ -1.56
TRA1P38811 YMR155WYMR155W 1644 nt5.32□□□□□ -1.56
TRA1P38811 PRO3YER023W 861 nt5.32□□□□□ -1.56
TRA1P38811 tR(ACG)DtR(ACG)D 73 nt5.32□□□□□ -1.56
TRA1P38811 tR(ACG)EtR(ACG)E 73 nt5.32□□□□□ -1.56
TRA1P38811 tR(ACG)KtR(ACG)K 73 nt5.32□□□□□ -1.56
TRA1P38811 tR(ACG)LtR(ACG)L 73 nt5.32□□□□□ -1.56
TRA1P38811 tR(ACG)OtR(ACG)O 73 nt5.32□□□□□ -1.56
TRA1P38811 YPL257WYPL257W 582 nt5.32□□□□□ -1.56
TRA1P38811 HEM1YDR232W 1647 nt5.31□□□□□ -1.56
TRA1P38811 MEH1YKR007W 555 nt5.31□□□□□ -1.56
TRA1P38811 YOR072WYOR072W 315 nt5.31□□□□□ -1.56
TRA1P38811 YPR204WYPR204W 3099 nt5.31□□□□□ -1.56
TRA1P38811 RPS5YJR123W 678 nt5.3□□□□□ -1.56
TRA1P38811 ATP14YLR295C 375 nt5.3□□□□□ -1.56
TRA1P38811 MLC1YGL106W 450 nt5.3□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms